Strain Fitness in Shewanella loihica PV-4 around Shew_0206
Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 10 mg/ml |
---|---|---|---|---|---|
remove | |||||
218,822 | + | Shew_0205 | 0.59 | +0.1 | |
218,822 | + | Shew_0205 | 0.59 | -0.1 | |
218,822 | + | Shew_0205 | 0.59 | +0.4 | |
218,822 | + | Shew_0205 | 0.59 | +0.5 | |
218,830 | - | Shew_0205 | 0.60 | +0.2 | |
218,944 | + | Shew_0205 | 0.69 | +0.1 | |
219,103 | + | Shew_0205 | 0.82 | -0.7 | |
219,152 | + | Shew_0205 | 0.86 | -0.0 | |
219,152 | + | Shew_0205 | 0.86 | +0.9 | |
219,402 | - | -0.7 | |||
219,812 | + | Shew_0206 | 0.29 | -0.0 | |
219,957 | + | Shew_0206 | 0.40 | -0.9 | |
220,015 | + | Shew_0206 | 0.44 | -0.8 | |
220,357 | - | Shew_0206 | 0.69 | -0.4 | |
220,423 | + | Shew_0206 | 0.74 | -0.8 |
Or see this region's nucleotide sequence