Experiment: Paraquat dichloride 10 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0086 and moaA are separated by 315 nucleotides moaA and Shew_0088 are separated by 111 nucleotides Shew_0088 and moaC overlap by 8 nucleotides
Shew_0086: Shew_0086 - electron-transferring-flavoproteindehydrogenase (RefSeq), at 99,591 to 101,240
_0086
Shew_0087: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 101,556 to 102,569
moaA
Shew_0088: Shew_0088 - molybdenum cofactor biosynthesis protein B (RefSeq), at 102,681 to 103,211
_0088
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Position (kb) 101
102
103 Strain fitness (log2 ratio) -1
0
1
2
3 at 100.729 kb on - strand, within Shew_0086 at 100.740 kb on - strand, within Shew_0086 at 100.846 kb on + strand, within Shew_0086 at 100.972 kb on - strand, within Shew_0086 at 101.020 kb on - strand, within Shew_0086 at 101.178 kb on + strand at 101.564 kb on + strand at 101.755 kb on + strand, within moaA at 101.864 kb on - strand, within moaA at 101.956 kb on + strand, within moaA at 101.956 kb on + strand, within moaA at 101.956 kb on + strand, within moaA at 101.964 kb on - strand, within moaA at 101.964 kb on - strand, within moaA at 102.046 kb on - strand, within moaA at 102.118 kb on + strand, within moaA at 102.126 kb on - strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.445 kb on + strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.453 kb on - strand, within moaA at 102.476 kb on + strand at 102.488 kb on + strand at 102.609 kb on + strand at 102.658 kb on + strand at 102.685 kb on - strand at 102.726 kb on + strand at 102.737 kb on + strand, within Shew_0088 at 102.753 kb on - strand, within Shew_0088 at 103.015 kb on + strand, within Shew_0088 at 103.023 kb on - strand, within Shew_0088 at 103.038 kb on + strand, within Shew_0088 at 103.143 kb on + strand, within Shew_0088 at 103.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 10 mg/ml remove 100,729 - Shew_0086 0.69 +0.9 100,740 - Shew_0086 0.70 +2.6 100,846 + Shew_0086 0.76 +1.1 100,972 - Shew_0086 0.84 +1.7 101,020 - Shew_0086 0.87 +2.9 101,178 + +1.9 101,564 + -0.1 101,755 + moaA Shew_0087 0.20 +0.6 101,864 - moaA Shew_0087 0.30 +0.7 101,956 + moaA Shew_0087 0.39 +0.5 101,956 + moaA Shew_0087 0.39 -1.5 101,956 + moaA Shew_0087 0.39 +1.2 101,964 - moaA Shew_0087 0.40 -1.3 101,964 - moaA Shew_0087 0.40 +1.4 102,046 - moaA Shew_0087 0.48 +0.3 102,118 + moaA Shew_0087 0.55 +0.2 102,126 - moaA Shew_0087 0.56 +0.5 102,445 + moaA Shew_0087 0.88 +1.5 102,445 + moaA Shew_0087 0.88 +1.1 102,445 + moaA Shew_0087 0.88 -0.2 102,453 - moaA Shew_0087 0.88 +0.5 102,453 - moaA Shew_0087 0.88 +0.7 102,453 - moaA Shew_0087 0.88 +0.5 102,453 - moaA Shew_0087 0.88 +0.7 102,476 + +0.5 102,488 + +0.4 102,609 + -0.1 102,658 + +0.1 102,685 - +0.2 102,726 + -1.1 102,737 + Shew_0088 0.11 -1.4 102,753 - Shew_0088 0.14 -0.3 103,015 + Shew_0088 0.63 -0.0 103,023 - Shew_0088 0.64 -0.0 103,038 + Shew_0088 0.67 -0.3 103,143 + Shew_0088 0.87 -0.3 103,172 - -0.2
Or see this region's nucleotide sequence