Strain Fitness in Shewanella loihica PV-4 around Shew_0061

Experiment: Paraquat dichloride 10 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 10 mg/ml
72,415	+		Shew_0059	0.89	+0.5
72,556	-				+2.9
72,614	-				+0.5
72,629	-				+0.6
72,644	+				+0.7
72,987	+		Shew_0060	0.40	+0.8
72,987	+		Shew_0060	0.40	+0.6
72,987	+		Shew_0060	0.40	+0.7
72,995	-		Shew_0060	0.42	+0.6
73,003	-		Shew_0060	0.43	+1.5
73,133	+		Shew_0060	0.65	+0.7
73,141	-		Shew_0060	0.66	+0.5
73,206	+		Shew_0060	0.77	-0.5
73,365	-				+1.2
73,374	+				+0.7
73,638	+		Shew_0061	0.25	-0.1
73,828	+		Shew_0061	0.43	+1.1
73,836	-		Shew_0061	0.44	-0.6
73,853	-		Shew_0061	0.46	+0.7
73,988	+		Shew_0061	0.59	+0.6
73,996	-		Shew_0061	0.60	+0.3
74,048	-		Shew_0061	0.65	+0.9
74,119	-		Shew_0061	0.72	+1.1
74,119	-		Shew_0061	0.72	+0.6
74,130	+		Shew_0061	0.73	+0.5
74,295	-		Shew_0061	0.90	+0.4
74,330	-				+2.5
74,330	-				-1.0
74,332	+				+0.2
74,332	+				+0.6
74,332	+				+0.2
74,340	-				+0.3
74,340	-				+0.6
74,399	-				+1.1
74,642	+				+0.3
74,653	+				+0.7
74,653	+				+0.3
74,661	-				+0.5
74,661	-				+0.2