Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2262

Experiment: Flask grown to static phase (untill yellowing)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown to static phase (untill yellowing)
2,328,826	+				-1.3
2,328,834	-				-2.3
2,328,855	+				+1.3
2,328,914	-		Synpcc7942_2260	0.11	-0.5
2,328,930	+		Synpcc7942_2260	0.16	+1.2
2,328,930	+		Synpcc7942_2260	0.16	-2.1
2,328,938	-		Synpcc7942_2260	0.18	+0.6
2,328,938	-		Synpcc7942_2260	0.18	-0.3
2,328,989	+		Synpcc7942_2260	0.34	-0.5
2,328,989	+		Synpcc7942_2260	0.34	-1.1
2,328,989	+		Synpcc7942_2260	0.34	+0.9
2,329,022	+		Synpcc7942_2260	0.44	+0.2
2,329,045	-		Synpcc7942_2260	0.51	-0.4
2,329,079	-		Synpcc7942_2260	0.61	+0.1
2,329,092	+		Synpcc7942_2260	0.65	+0.6
2,329,092	+		Synpcc7942_2260	0.65	-0.8
2,329,092	+		Synpcc7942_2260	0.65	+0.4
2,329,100	-		Synpcc7942_2260	0.68	+0.5
2,329,170	+		Synpcc7942_2260	0.89	-0.1
2,329,178	-				-0.6
2,329,227	+				+0.9
2,329,235	-				+0.1
2,329,242	+				+1.2
2,329,259	+				-1.1
2,329,345	+				+0.4
2,329,349	-				-0.2
2,329,369	+				+0.5
2,329,374	-				-0.5
2,329,374	-				-0.4
2,329,419	-				+1.3
2,329,419	-				-0.7
2,329,432	-				+0.7
2,329,439	+				+1.2
2,329,453	-				+3.9
2,329,455	-				-1.6
2,329,457	+				-2.9
2,329,457	+				+2.0
2,329,481	+				-0.7
2,329,481	+				+2.1
2,329,487	-		Synpcc7942_2261	0.11	+0.3
2,329,489	-		Synpcc7942_2261	0.12	-0.3
2,329,508	+		Synpcc7942_2261	0.17	+3.7
2,329,523	-		Synpcc7942_2261	0.22	+1.2
2,329,527	+		Synpcc7942_2261	0.23	-2.0
2,329,528	+		Synpcc7942_2261	0.23	-0.0
2,329,535	-		Synpcc7942_2261	0.25	+2.1
2,329,536	-		Synpcc7942_2261	0.25	+0.9
2,329,572	-		Synpcc7942_2261	0.36	+1.3
2,329,585	+		Synpcc7942_2261	0.40	-0.2
2,329,594	-		Synpcc7942_2261	0.42	+1.2
2,329,612	-		Synpcc7942_2261	0.48	+0.9
2,329,652	-		Synpcc7942_2261	0.59	+1.1
2,329,652	-		Synpcc7942_2261	0.59	-1.1
2,329,655	+		Synpcc7942_2261	0.60	+0.7
2,329,660	+				+2.6
2,329,663	-		Synpcc7942_2261	0.63	+1.4
2,329,735	+		Synpcc7942_2261	0.84	+5.1
2,329,735	+				+0.1
2,329,735	+		Synpcc7942_2261	0.84	+0.0
2,329,743	-		Synpcc7942_2261	0.86	-0.1
2,329,752	+		Synpcc7942_2261	0.89	+0.4
2,329,774	+				-0.4
2,329,781	+				+1.4
2,329,784	-				-1.1
2,329,786	+				-1.4
2,329,794	-				+0.1
2,329,794	-				-0.1
2,329,797	+				+0.3
2,329,797	+				+3.2
2,329,805	-				-1.0
2,329,805	-				+3.4
2,329,821	+				+3.0
2,329,834	+				+0.2
2,329,835	+				+3.7
2,329,846	+				+3.8
2,329,846	+				+3.1
2,329,846	+				+1.6
2,329,851	+				+3.6
2,329,854	-				+3.2
2,329,854	-				+3.3
2,329,861	+				+3.2
2,329,861	+				+3.5
2,329,861	+				+4.5
2,329,861	+				+3.5
2,329,861	+				+4.6
2,329,861	+				-1.2
2,329,861	+				+1.4
2,329,861	+				+3.9
2,329,861	+				+3.1
2,329,861	+				+2.9
2,329,869	-				+3.8
2,329,869	-				+3.5
2,329,869	-				+4.8
2,329,869	-				-0.8
2,329,869	-				-0.1
2,329,869	-				+1.6
2,329,869	-				+3.5
2,329,927	-				+6.4
2,329,957	-		Synpcc7942_2262	0.12	+3.3
2,329,959	+		Synpcc7942_2262	0.12	-0.8
2,329,970	+		Synpcc7942_2262	0.13	+2.9
2,329,973	-		Synpcc7942_2262	0.13	+1.8
2,329,978	+		Synpcc7942_2262	0.14	+2.7
2,330,011	+				+5.3
2,330,019	-		Synpcc7942_2262	0.16	+2.4
2,330,019	-		Synpcc7942_2262	0.16	-0.3
2,330,043	-		Synpcc7942_2262	0.18	+3.0
2,330,054	-		Synpcc7942_2262	0.19	+2.1
2,330,062	-		Synpcc7942_2262	0.20	+3.4
2,330,092	+		Synpcc7942_2262	0.22	+3.9
2,330,099	+		Synpcc7942_2262	0.22	+1.9
2,330,146	+		Synpcc7942_2262	0.25	+4.1
2,330,148	-		Synpcc7942_2262	0.26	+0.3
2,330,154	-		Synpcc7942_2262	0.26	+0.6
2,330,179	-				+6.0
2,330,204	-		Synpcc7942_2262	0.30	+2.3
2,330,238	+		Synpcc7942_2262	0.32	+2.9
2,330,246	-		Synpcc7942_2262	0.33	+3.6
2,330,248	+		Synpcc7942_2262	0.33	+3.0
2,330,248	+		Synpcc7942_2262	0.33	+3.6
2,330,248	+		Synpcc7942_2262	0.33	+0.5
2,330,257	-		Synpcc7942_2262	0.33	+4.3
2,330,259	+				+4.3
2,330,259	+		Synpcc7942_2262	0.33	+0.2
2,330,267	-		Synpcc7942_2262	0.34	+2.2
2,330,281	+		Synpcc7942_2262	0.35	+1.8
2,330,295	+		Synpcc7942_2262	0.36	+0.9
2,330,296	+		Synpcc7942_2262	0.36	-0.3
2,330,304	-		Synpcc7942_2262	0.37	-0.3
2,330,327	+		Synpcc7942_2262	0.38	+3.3
2,330,329	-		Synpcc7942_2262	0.38	+2.6
2,330,379	+		Synpcc7942_2262	0.42	+2.9
2,330,393	+		Synpcc7942_2262	0.43	+5.4
2,330,393	+		Synpcc7942_2262	0.43	+2.9
2,330,401	-		Synpcc7942_2262	0.44	+0.9
2,330,406	+		Synpcc7942_2262	0.44	+6.2
2,330,406	+		Synpcc7942_2262	0.44	+0.1
2,330,414	-		Synpcc7942_2262	0.44	-1.4
2,330,414	-		Synpcc7942_2262	0.44	+4.1
2,330,414	-		Synpcc7942_2262	0.44	+3.6
2,330,421	+		Synpcc7942_2262	0.45	+2.7
2,330,424	-		Synpcc7942_2262	0.45	+2.6
2,330,429	-		Synpcc7942_2262	0.46	+2.5
2,330,429	-		Synpcc7942_2262	0.46	+2.5
2,330,429	-		Synpcc7942_2262	0.46	+3.1
2,330,436	+		Synpcc7942_2262	0.46	+2.4
2,330,437	+		Synpcc7942_2262	0.46	+0.2
2,330,443	-		Synpcc7942_2262	0.47	+1.4
2,330,476	+		Synpcc7942_2262	0.49	-0.2
2,330,482	+		Synpcc7942_2262	0.49	+4.2
2,330,488	-		Synpcc7942_2262	0.50	-0.7
2,330,488	-		Synpcc7942_2262	0.50	+3.4
2,330,502	+		Synpcc7942_2262	0.51	-0.4
2,330,510	-		Synpcc7942_2262	0.51	+3.3
2,330,511	+		Synpcc7942_2262	0.51	+2.2
2,330,516	+		Synpcc7942_2262	0.52	+3.6
2,330,524	-		Synpcc7942_2262	0.52	+3.6
2,330,569	-		Synpcc7942_2262	0.55	+6.1
2,330,580	+		Synpcc7942_2262	0.56	+3.1
2,330,592	-		Synpcc7942_2262	0.57	+5.5
2,330,592	-		Synpcc7942_2262	0.57	-0.0
2,330,593	-		Synpcc7942_2262	0.57	+7.1
2,330,593	-		Synpcc7942_2262	0.57	+3.4
2,330,593	-		Synpcc7942_2262	0.57	+4.2
2,330,597	+		Synpcc7942_2262	0.57	+5.4
2,330,608	+		Synpcc7942_2262	0.58	-0.0
2,330,608	+		Synpcc7942_2262	0.58	+3.9
2,330,608	+		Synpcc7942_2262	0.58	+1.7
2,330,608	+		Synpcc7942_2262	0.58	+3.6
2,330,608	+		Synpcc7942_2262	0.58	+2.3
2,330,608	+		Synpcc7942_2262	0.58	+3.7
2,330,608	+				+0.6
2,330,608	+		Synpcc7942_2262	0.58	+4.1
2,330,608	+		Synpcc7942_2262	0.58	+2.9
2,330,608	+		Synpcc7942_2262	0.58	+3.0
2,330,615	+		Synpcc7942_2262	0.59	+0.4
2,330,616	-		Synpcc7942_2262	0.59	+0.9
2,330,616	-		Synpcc7942_2262	0.59	-0.8
2,330,616	-		Synpcc7942_2262	0.59	+4.6
2,330,616	-		Synpcc7942_2262	0.59	+3.1
2,330,616	-		Synpcc7942_2262	0.59	+2.6
2,330,616	-		Synpcc7942_2262	0.59	+3.5
2,330,616	-		Synpcc7942_2262	0.59	-0.1
2,330,616	-		Synpcc7942_2262	0.59	+2.7
2,330,616	-		Synpcc7942_2262	0.59	+2.5
2,330,616	-		Synpcc7942_2262	0.59	+4.5
2,330,663	+		Synpcc7942_2262	0.62	+0.6
2,330,671	-		Synpcc7942_2262	0.63	+3.8
2,330,702	-		Synpcc7942_2262	0.65	-0.4
2,330,718	+		Synpcc7942_2262	0.66	+3.6
2,330,718	+		Synpcc7942_2262	0.66	+4.0
2,330,731	+		Synpcc7942_2262	0.67	+2.9
2,330,755	+		Synpcc7942_2262	0.69	+0.3
2,330,768	-		Synpcc7942_2262	0.70	+4.6
2,330,789	+		Synpcc7942_2262	0.71	+4.9
2,330,817	+		Synpcc7942_2262	0.73	+1.3
2,330,831	+		Synpcc7942_2262	0.74	+6.0
2,330,833	+		Synpcc7942_2262	0.74	+0.2
2,330,833	+		Synpcc7942_2262	0.74	+3.7
2,330,833	+		Synpcc7942_2262	0.74	+0.5
2,330,846	-		Synpcc7942_2262	0.75	+2.0
2,330,855	+		Synpcc7942_2262	0.76	+3.5
2,330,861	+		Synpcc7942_2262	0.76	+0.7
2,330,896	+		Synpcc7942_2262	0.79	+3.1
2,330,910	-		Synpcc7942_2262	0.80	+5.3
2,330,926	+		Synpcc7942_2262	0.81	+3.4
2,330,938	+		Synpcc7942_2262	0.82	+2.2
2,330,938	+		Synpcc7942_2262	0.82	+3.3
2,330,949	+		Synpcc7942_2262	0.82	+0.2
2,330,957	-		Synpcc7942_2262	0.83	+2.1
2,330,957	-		Synpcc7942_2262	0.83	+1.7
2,330,958	-		Synpcc7942_2262	0.83	+3.5
2,330,975	-		Synpcc7942_2262	0.84	+3.6
2,331,001	-		Synpcc7942_2262	0.86	+1.2
2,331,004	+		Synpcc7942_2262	0.86	+3.5
2,331,071	-				+1.0
2,331,079	+				-0.2
2,331,250	-				-0.2
2,331,260	+				+2.3
2,331,260	+				-1.9
2,331,265	-				-2.1
2,331,265	-				-2.9
2,331,268	-				-0.8