Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS23745 and CA265_RS23750 are separated by 197 nucleotides CA265_RS23750 and CA265_RS23755 are separated by 560 nucleotides
CA265_RS23745: CA265_RS23745 - alpha/beta hydrolase, at 5,795,567 to 5,796,340
_RS23745
CA265_RS23750: CA265_RS23750 - translational GTPase TypA, at 5,796,538 to 5,798,343
_RS23750
CA265_RS23755: CA265_RS23755 - lauroyl acyltransferase, at 5,798,904 to 5,799,830
_RS23755
Position (kb) 5796
5797
5798
5799 Strain fitness (log2 ratio) -1
0
1
2 at 5795.595 kb on + strand at 5795.611 kb on - strand at 5795.660 kb on - strand, within CA265_RS23745 at 5795.666 kb on + strand, within CA265_RS23745 at 5795.667 kb on - strand, within CA265_RS23745 at 5795.677 kb on + strand, within CA265_RS23745 at 5795.678 kb on - strand, within CA265_RS23745 at 5795.678 kb on - strand, within CA265_RS23745 at 5795.743 kb on - strand, within CA265_RS23745 at 5795.743 kb on - strand, within CA265_RS23745 at 5795.774 kb on - strand, within CA265_RS23745 at 5795.918 kb on - strand, within CA265_RS23745 at 5796.014 kb on + strand, within CA265_RS23745 at 5796.015 kb on - strand, within CA265_RS23745 at 5796.029 kb on - strand, within CA265_RS23745 at 5796.057 kb on + strand, within CA265_RS23745 at 5796.127 kb on - strand, within CA265_RS23745 at 5796.153 kb on + strand, within CA265_RS23745 at 5796.154 kb on - strand, within CA265_RS23745 at 5796.182 kb on - strand, within CA265_RS23745 at 5796.182 kb on - strand at 5796.235 kb on + strand, within CA265_RS23745 at 5796.235 kb on + strand, within CA265_RS23745 at 5796.236 kb on - strand, within CA265_RS23745 at 5796.317 kb on - strand at 5796.338 kb on + strand at 5796.355 kb on + strand at 5796.356 kb on - strand at 5796.379 kb on - strand at 5796.444 kb on + strand at 5796.448 kb on + strand at 5796.465 kb on - strand at 5796.484 kb on - strand at 5796.562 kb on - strand at 5796.565 kb on - strand at 5797.035 kb on + strand, within CA265_RS23750 at 5797.110 kb on + strand, within CA265_RS23750 at 5797.172 kb on - strand, within CA265_RS23750 at 5797.172 kb on - strand, within CA265_RS23750 at 5797.296 kb on + strand, within CA265_RS23750 at 5797.334 kb on + strand, within CA265_RS23750 at 5797.347 kb on + strand, within CA265_RS23750 at 5797.362 kb on - strand, within CA265_RS23750 at 5797.392 kb on + strand, within CA265_RS23750 at 5797.474 kb on - strand, within CA265_RS23750 at 5797.739 kb on + strand, within CA265_RS23750 at 5797.885 kb on - strand, within CA265_RS23750 at 5798.094 kb on + strand, within CA265_RS23750 at 5798.124 kb on - strand, within CA265_RS23750 at 5798.208 kb on + strand at 5798.236 kb on + strand at 5798.254 kb on + strand at 5798.285 kb on + strand at 5798.355 kb on + strand at 5798.355 kb on + strand at 5798.357 kb on + strand at 5798.357 kb on + strand at 5798.362 kb on - strand at 5798.365 kb on - strand at 5798.441 kb on - strand at 5798.469 kb on - strand at 5798.480 kb on + strand at 5798.496 kb on - strand at 5798.498 kb on + strand at 5798.498 kb on + strand at 5798.674 kb on - strand at 5798.675 kb on + strand at 5798.675 kb on + strand at 5798.734 kb on - strand at 5798.835 kb on + strand at 5798.910 kb on - strand at 5798.936 kb on - strand at 5798.968 kb on + strand at 5799.010 kb on + strand, within CA265_RS23755 at 5799.222 kb on + strand, within CA265_RS23755 at 5799.330 kb on + strand, within CA265_RS23755
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Dimethyl Sulfoxide 7.5 vol% remove 5,795,595 + +0.9 5,795,611 - -0.7 5,795,660 - CA265_RS23745 0.12 +0.5 5,795,666 + CA265_RS23745 0.13 +0.3 5,795,667 - CA265_RS23745 0.13 -0.4 5,795,677 + CA265_RS23745 0.14 -0.6 5,795,678 - CA265_RS23745 0.14 +0.1 5,795,678 - CA265_RS23745 0.14 +0.8 5,795,743 - CA265_RS23745 0.23 -0.2 5,795,743 - CA265_RS23745 0.23 +0.4 5,795,774 - CA265_RS23745 0.27 +0.4 5,795,918 - CA265_RS23745 0.45 -0.8 5,796,014 + CA265_RS23745 0.58 -0.0 5,796,015 - CA265_RS23745 0.58 +0.3 5,796,029 - CA265_RS23745 0.60 +0.2 5,796,057 + CA265_RS23745 0.63 -0.0 5,796,127 - CA265_RS23745 0.72 +2.1 5,796,153 + CA265_RS23745 0.76 +0.6 5,796,154 - CA265_RS23745 0.76 +0.1 5,796,182 - CA265_RS23745 0.79 +0.5 5,796,182 - +1.0 5,796,235 + CA265_RS23745 0.86 -0.2 5,796,235 + CA265_RS23745 0.86 +1.1 5,796,236 - CA265_RS23745 0.86 +0.7 5,796,317 - +0.6 5,796,338 + +0.9 5,796,355 + -1.1 5,796,356 - +0.6 5,796,379 - +1.0 5,796,444 + +0.3 5,796,448 + -0.6 5,796,465 - -0.4 5,796,484 - +0.3 5,796,562 - +2.1 5,796,565 - +2.0 5,797,035 + CA265_RS23750 0.28 +2.7 5,797,110 + CA265_RS23750 0.32 +1.0 5,797,172 - CA265_RS23750 0.35 +1.6 5,797,172 - CA265_RS23750 0.35 +1.0 5,797,296 + CA265_RS23750 0.42 -0.8 5,797,334 + CA265_RS23750 0.44 +0.6 5,797,347 + CA265_RS23750 0.45 +1.3 5,797,362 - CA265_RS23750 0.46 +2.5 5,797,392 + CA265_RS23750 0.47 +1.7 5,797,474 - CA265_RS23750 0.52 +0.9 5,797,739 + CA265_RS23750 0.67 +1.6 5,797,885 - CA265_RS23750 0.75 +2.0 5,798,094 + CA265_RS23750 0.86 +0.6 5,798,124 - CA265_RS23750 0.88 +2.1 5,798,208 + +2.2 5,798,236 + +2.1 5,798,254 + +1.1 5,798,285 + +2.4 5,798,355 + -0.2 5,798,355 + +0.5 5,798,357 + -0.1 5,798,357 + +1.3 5,798,362 - +0.7 5,798,365 - -0.1 5,798,441 - +1.2 5,798,469 - +1.0 5,798,480 + +0.3 5,798,496 - +0.4 5,798,498 + +0.3 5,798,498 + +0.2 5,798,674 - -0.6 5,798,675 + -0.1 5,798,675 + +0.7 5,798,734 - -0.1 5,798,835 + +0.6 5,798,910 - +0.1 5,798,936 - -0.2 5,798,968 + -0.6 5,799,010 + CA265_RS23755 0.11 -0.3 5,799,222 + CA265_RS23755 0.34 +1.0 5,799,330 + CA265_RS23755 0.46 +0.1
Or see this region's nucleotide sequence