Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18725

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
4,661,780	+		CA265_RS18720	0.65	+0.2
4,661,790	+		CA265_RS18720	0.65	+0.3
4,661,791	-		CA265_RS18720	0.66	-1.1
4,661,797	-		CA265_RS18720	0.66	+1.3
4,661,838	+		CA265_RS18720	0.68	+0.0
4,661,852	+		CA265_RS18720	0.68	-0.0
4,661,864	+		CA265_RS18720	0.69	-0.8
4,661,864	+		CA265_RS18720	0.69	-0.2
4,661,966	+		CA265_RS18720	0.73	-1.2
4,662,009	-		CA265_RS18720	0.75	-0.8
4,662,009	-		CA265_RS18720	0.75	-1.1
4,662,029	-		CA265_RS18720	0.76	+0.7
4,662,174	+		CA265_RS18720	0.83	-0.7
4,662,198	+		CA265_RS18720	0.84	-2.3
4,662,198	+		CA265_RS18720	0.84	+0.8
4,662,287	+		CA265_RS18720	0.88	-0.4
4,662,292	-		CA265_RS18720	0.88	-1.9
4,662,294	+		CA265_RS18720	0.88	+0.3
4,662,296	+		CA265_RS18720	0.88	+0.9
4,662,297	-		CA265_RS18720	0.89	-0.4
4,662,344	-				-0.8
4,662,476	+				+0.3
4,662,476	+				-1.2
4,662,556	+				-0.8
4,662,557	-				+0.5
4,662,558	+				-1.0
4,662,602	+				-1.0
4,662,609	+				+0.7
4,662,631	+				+0.5
4,662,657	+				-0.2
4,662,700	-				+0.3
4,662,700	-				-0.0
4,662,774	-				-1.0
4,662,776	+				+0.3
4,662,776	+				-0.9
4,662,777	-				-0.4
4,662,795	+				-0.5
4,662,864	-		CA265_RS18725	0.11	+0.2
4,662,885	-		CA265_RS18725	0.14	-0.2
4,662,950	+		CA265_RS18725	0.22	-1.0
4,662,951	-		CA265_RS18725	0.22	-1.3
4,662,986	+		CA265_RS18725	0.26	-3.5
4,662,987	-		CA265_RS18725	0.26	+0.2
4,663,021	-		CA265_RS18725	0.30	-0.9
4,663,107	+		CA265_RS18725	0.41	-0.4
4,663,107	+		CA265_RS18725	0.41	+0.0
4,663,167	+		CA265_RS18725	0.48	-0.5
4,663,314	-		CA265_RS18725	0.66	+0.1
4,663,433	+		CA265_RS18725	0.80	-0.2
4,663,449	+		CA265_RS18725	0.82	-0.4
4,663,458	+		CA265_RS18725	0.83	-0.8
4,663,546	+				+0.2
4,663,594	+				-0.5
4,663,624	-				-0.3
4,663,647	+				+0.1
4,663,734	+				+0.1
4,663,742	+				+1.3
4,663,743	-				+0.1
4,663,743	-				+0.3
4,663,758	-				+0.8
4,663,802	-				+0.0
4,663,808	-				+0.4
4,663,815	+				-1.9
4,663,816	-				+0.2
4,663,838	+				+0.2
4,663,839	-				-0.0
4,663,861	+				+0.7
4,663,862	-				-0.5
4,663,865	+				+0.2
4,663,866	-				-2.5
4,663,923	+				-0.8
4,663,923	+				+0.5
4,663,924	-				-0.5
4,663,929	+		CA265_RS18730	0.10	+1.2
4,663,929	+		CA265_RS18730	0.10	-0.6
4,663,941	+		CA265_RS18730	0.11	+0.1
4,663,942	-		CA265_RS18730	0.11	+0.3
4,663,948	-		CA265_RS18730	0.11	+0.5
4,663,948	-		CA265_RS18730	0.11	+0.5
4,663,950	-		CA265_RS18730	0.11	-2.5
4,663,990	+		CA265_RS18730	0.14	+1.4
4,664,022	+		CA265_RS18730	0.15	-0.5
4,664,022	+		CA265_RS18730	0.15	-0.7
4,664,023	-		CA265_RS18730	0.15	+0.5
4,664,151	+		CA265_RS18730	0.23	-0.1
4,664,151	+		CA265_RS18730	0.23	+0.2
4,664,151	+		CA265_RS18730	0.23	-0.4
4,664,197	-		CA265_RS18730	0.26	-0.2
4,664,206	+		CA265_RS18730	0.26	+1.1
4,664,228	+		CA265_RS18730	0.27	+0.0
4,664,228	+		CA265_RS18730	0.27	+1.1
4,664,229	-		CA265_RS18730	0.27	+0.1
4,664,229	-		CA265_RS18730	0.27	-0.5
4,664,251	-		CA265_RS18730	0.29	-0.7
4,664,268	+		CA265_RS18730	0.30	-1.3
4,664,274	-		CA265_RS18730	0.30	-0.5
4,664,388	+		CA265_RS18730	0.37	+0.9
4,664,429	+		CA265_RS18730	0.39	-0.0
4,664,430	-		CA265_RS18730	0.39	+1.4
4,664,440	+		CA265_RS18730	0.40	+0.4
4,664,440	+		CA265_RS18730	0.40	-0.5
4,664,440	+		CA265_RS18730	0.40	-1.1
4,664,440	+				-0.5
4,664,440	+		CA265_RS18730	0.40	-0.6
4,664,445	+		CA265_RS18730	0.40	-0.8
4,664,445	+		CA265_RS18730	0.40	-1.2
4,664,497	+		CA265_RS18730	0.43	+1.5
4,664,497	+		CA265_RS18730	0.43	+0.2
4,664,586	+		CA265_RS18730	0.48	-0.1