Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11120

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,735,459	-		CA265_RS11115	0.51	+0.1
2,735,459	-		CA265_RS11115	0.51	+0.1
2,735,464	-		CA265_RS11115	0.52	-0.7
2,735,465	-		CA265_RS11115	0.52	-0.9
2,735,466	+		CA265_RS11115	0.52	+0.2
2,735,477	+		CA265_RS11115	0.52	-0.1
2,735,521	+		CA265_RS11115	0.54	-1.2
2,735,545	+		CA265_RS11115	0.56	+0.1
2,735,546	-		CA265_RS11115	0.56	+0.1
2,735,717	-		CA265_RS11115	0.64	-1.0
2,735,744	-		CA265_RS11115	0.65	+0.1
2,735,803	-		CA265_RS11115	0.68	-0.7
2,735,842	+		CA265_RS11115	0.70	-0.2
2,735,977	-		CA265_RS11115	0.77	+1.5
2,735,988	-		CA265_RS11115	0.77	-0.1
2,736,033	-		CA265_RS11115	0.80	-0.0
2,736,082	-		CA265_RS11115	0.82	-0.4
2,736,121	+		CA265_RS11115	0.84	-0.6
2,736,132	+		CA265_RS11115	0.84	+0.0
2,736,153	+		CA265_RS11115	0.85	-0.0
2,736,153	+		CA265_RS11115	0.85	+0.8
2,736,166	-		CA265_RS11115	0.86	+1.1
2,736,166	-		CA265_RS11115	0.86	+0.2
2,736,166	-		CA265_RS11115	0.86	-0.2
2,736,170	-		CA265_RS11115	0.86	-0.8
2,736,249	+				+0.3
2,736,249	+				+0.2
2,736,266	-				-0.5
2,736,284	-				+0.1
2,736,298	+				+0.3
2,736,331	+				-0.6
2,736,345	+				+0.3
2,736,389	-				+1.5
2,736,409	+				+0.3
2,736,419	-				-0.2
2,736,482	-				-0.2
2,736,491	-				+0.8
2,736,501	+				-0.1
2,736,536	-				+0.4
2,736,588	+		CA265_RS11120	0.11	+0.6
2,736,588	+		CA265_RS11120	0.11	-0.1
2,736,588	+		CA265_RS11120	0.11	+0.7
2,736,589	-		CA265_RS11120	0.11	+0.2
2,736,589	-		CA265_RS11120	0.11	+0.6
2,736,653	+		CA265_RS11120	0.16	+0.3
2,736,654	-		CA265_RS11120	0.16	+0.2
2,736,654	-		CA265_RS11120	0.16	+1.1
2,736,676	+		CA265_RS11120	0.18	-0.7
2,736,720	-		CA265_RS11120	0.21	+2.1
2,736,720	-		CA265_RS11120	0.21	+0.9
2,736,750	-		CA265_RS11120	0.24	+1.1
2,736,766	-		CA265_RS11120	0.25	+0.5
2,736,809	+		CA265_RS11120	0.29	+1.7
2,736,816	-		CA265_RS11120	0.29	+0.2
2,736,820	-		CA265_RS11120	0.30	+0.3
2,736,820	-		CA265_RS11120	0.30	-0.2
2,736,821	+		CA265_RS11120	0.30	-0.0
2,736,822	-		CA265_RS11120	0.30	+0.4
2,736,906	-		CA265_RS11120	0.37	+0.4
2,736,914	+		CA265_RS11120	0.37	-0.8
2,736,956	+		CA265_RS11120	0.41	-0.0
2,737,024	-		CA265_RS11120	0.47	+1.2
2,737,223	+		CA265_RS11120	0.63	+0.1
2,737,251	+		CA265_RS11120	0.65	-1.1
2,737,284	+		CA265_RS11120	0.68	+0.6
2,737,316	+		CA265_RS11120	0.71	+0.1
2,737,317	-		CA265_RS11120	0.71	+0.9
2,737,359	+		CA265_RS11120	0.74	+0.8
2,737,359	+		CA265_RS11120	0.74	+0.3
2,737,370	+		CA265_RS11120	0.75	-0.5
2,737,371	-		CA265_RS11120	0.75	+1.0
2,737,452	+		CA265_RS11120	0.82	+0.6
2,737,452	+		CA265_RS11120	0.82	-1.2
2,737,469	-		CA265_RS11120	0.83	+1.5
2,737,469	-		CA265_RS11120	0.83	+1.2
2,737,487	-		CA265_RS11120	0.85	+1.8
2,737,574	+				+0.2
2,737,575	-				+0.4
2,737,587	-				+0.6
2,737,587	-				+0.8
2,737,624	+				-0.3
2,737,667	-				+0.6
2,737,699	+				+1.6
2,737,699	+				+0.4
2,737,702	+				-0.5
2,737,832	+				+0.1
2,737,843	-				-0.3
2,737,877	+				-0.3
2,737,878	-				-0.2
2,737,902	-				+0.3
2,737,933	+				+0.1
2,737,990	+				-0.4
2,737,991	-				+0.0
2,737,993	-				-0.0
2,738,090	+		CA265_RS11125	0.16	+0.1
2,738,120	-		CA265_RS11125	0.28	+0.1
2,738,120	-		CA265_RS11125	0.28	+0.1
2,738,159	-		CA265_RS11125	0.42	+0.9
2,738,203	+		CA265_RS11125	0.59	+0.3
2,738,209	+		CA265_RS11125	0.61	+0.0
2,738,214	-		CA265_RS11125	0.63	-1.7
2,738,228	+		CA265_RS11125	0.69	-0.0
2,738,308	+				+0.1
2,738,309	-				+0.4
2,738,374	+				-1.3
2,738,374	+				+0.3
2,738,375	-				+0.9
2,738,375	-				+0.7
2,738,428	+				+0.1
2,738,429	-				+0.6
2,738,429	-				-0.1
2,738,472	+				+1.3
2,738,472	+				-0.6
2,738,516	-				-0.0
2,738,528	+				+0.2
2,738,529	-				-1.0
2,738,529	-				-0.9
2,738,529	-				+0.1
2,738,532	+				+0.0
2,738,557	+		CA265_RS11130	0.10	+0.3
2,738,574	+		CA265_RS11130	0.11	+0.2
2,738,574	+		CA265_RS11130	0.11	-0.2
2,738,574	+		CA265_RS11130	0.11	-0.1