Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09375

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,326,814	-		CA265_RS09370	0.57	+0.2
2,326,822	-		CA265_RS09370	0.58	-0.3
2,326,837	-		CA265_RS09370	0.59	-0.6
2,326,846	+		CA265_RS09370	0.60	-0.8
2,326,960	+		CA265_RS09370	0.68	+0.3
2,326,968	-		CA265_RS09370	0.68	+0.5
2,326,975	+		CA265_RS09370	0.69	-0.7
2,327,057	-		CA265_RS09370	0.75	+0.5
2,327,134	+		CA265_RS09370	0.80	-0.2
2,327,184	-		CA265_RS09370	0.84	-0.2
2,327,185	+				-1.5
2,327,248	+		CA265_RS09370	0.89	-0.4
2,327,248	+				+1.0
2,327,272	+				+0.0
2,327,314	-				-0.5
2,327,335	+				-0.2
2,327,391	-				-1.6
2,327,392	+				-0.4
2,327,407	+				-0.3
2,327,424	+				-0.0
2,327,436	-				-0.5
2,327,448	+				-0.0
2,327,462	+				-1.0
2,327,468	+				+0.8
2,327,469	-				-2.0
2,327,542	-				-1.0
2,327,548	+				+0.3
2,327,566	+				-0.6
2,327,567	-				-0.9
2,327,571	-				+0.5
2,327,784	+				-0.2
2,327,902	+		CA265_RS09375	0.21	-0.7
2,327,902	+		CA265_RS09375	0.21	-0.1
2,327,906	-		CA265_RS09375	0.22	-1.5
2,327,906	-		CA265_RS09375	0.22	-0.7
2,327,914	-				-0.5
2,327,927	-		CA265_RS09375	0.25	-1.1
2,327,928	+		CA265_RS09375	0.26	-0.3
2,327,941	+		CA265_RS09375	0.28	-0.2
2,327,990	+		CA265_RS09375	0.37	-1.6
2,327,997	-		CA265_RS09375	0.38	-0.9
2,327,997	-		CA265_RS09375	0.38	+0.2
2,328,019	+		CA265_RS09375	0.42	-0.3
2,328,083	-		CA265_RS09375	0.54	-2.3
2,328,113	-		CA265_RS09375	0.59	-1.2
2,328,119	+		CA265_RS09375	0.60	-1.0
2,328,214	+		CA265_RS09375	0.77	+0.3
2,328,215	-		CA265_RS09375	0.77	-2.2
2,328,220	+		CA265_RS09375	0.78	+0.5
2,328,221	-		CA265_RS09375	0.78	-0.5
2,328,266	+		CA265_RS09375	0.86	-0.1
2,328,286	+				-0.3
2,328,320	-				+0.5
2,328,326	-				+1.0
2,328,331	+				+0.0
2,328,347	-				-1.1
2,328,354	+				+0.3
2,328,354	+				+0.5
2,328,383	+				-0.7
2,328,496	+		CA265_RS09380	0.12	-1.1
2,328,496	+		CA265_RS09380	0.12	+0.4
2,328,588	+		CA265_RS09380	0.19	+0.2
2,328,594	+		CA265_RS09380	0.20	-0.4
2,328,687	+		CA265_RS09380	0.27	+0.4
2,328,742	-		CA265_RS09380	0.31	-2.0
2,328,768	+		CA265_RS09380	0.33	-0.1
2,328,773	+		CA265_RS09380	0.34	-0.7
2,328,784	-		CA265_RS09380	0.35	-1.4
2,328,784	-		CA265_RS09380	0.35	-0.5
2,328,804	+		CA265_RS09380	0.36	-1.4
2,328,804	+		CA265_RS09380	0.36	-0.6
2,328,808	-		CA265_RS09380	0.36	-0.5
2,328,826	+		CA265_RS09380	0.38	+0.0
2,328,827	-		CA265_RS09380	0.38	-0.4
2,328,848	+		CA265_RS09380	0.40	+0.0
2,328,849	-		CA265_RS09380	0.40	-1.4
2,328,849	-		CA265_RS09380	0.40	-1.7
2,328,868	+		CA265_RS09380	0.41	+0.1
2,328,880	+		CA265_RS09380	0.42	+0.0
2,328,930	+		CA265_RS09380	0.46	+0.3
2,328,931	-		CA265_RS09380	0.46	-0.7
2,328,952	+		CA265_RS09380	0.48	-1.1
2,328,952	+		CA265_RS09380	0.48	-1.7
2,328,958	+		CA265_RS09380	0.48	+0.0
2,328,965	+		CA265_RS09380	0.49	+1.1
2,328,965	+		CA265_RS09380	0.49	+0.4
2,328,966	-		CA265_RS09380	0.49	-0.6
2,328,969	+		CA265_RS09380	0.49	+0.3
2,328,999	+		CA265_RS09380	0.51	+0.1
2,328,999	+		CA265_RS09380	0.51	-0.5
2,329,008	+		CA265_RS09380	0.52	+1.5
2,329,052	+		CA265_RS09380	0.56	+0.7
2,329,076	+		CA265_RS09380	0.57	+0.6
2,329,098	+		CA265_RS09380	0.59	-0.4
2,329,176	+		CA265_RS09380	0.65	+0.8
2,329,176	+		CA265_RS09380	0.65	+0.1
2,329,190	-		CA265_RS09380	0.66	-2.9
2,329,234	+		CA265_RS09380	0.70	-0.5
2,329,234	+		CA265_RS09380	0.70	+0.1
2,329,235	-		CA265_RS09380	0.70	-0.7
2,329,235	-		CA265_RS09380	0.70	-0.6
2,329,260	+		CA265_RS09380	0.72	+0.5
2,329,261	-		CA265_RS09380	0.72	-1.1
2,329,264	+		CA265_RS09380	0.72	+0.9
2,329,282	+		CA265_RS09380	0.74	-0.5
2,329,303	+		CA265_RS09380	0.75	+0.4