Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08070

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,006,840	-		CA265_RS08060	0.66	-0.6
2,006,897	+		CA265_RS08060	0.84	-0.5
2,006,952	+				-0.2
2,006,990	+				-0.2
2,006,999	-				-0.0
2,006,999	-				+0.3
2,007,005	+				-0.6
2,007,006	-				-0.3
2,007,033	+				-0.3
2,007,034	-				+0.5
2,007,062	+				+0.0
2,007,063	-				-0.4
2,007,072	+				+0.1
2,007,073	-				+0.8
2,007,102	-		CA265_RS08065	0.13	-0.8
2,007,102	-		CA265_RS08065	0.13	-0.8
2,007,130	-		CA265_RS08065	0.18	-0.5
2,007,230	-		CA265_RS08065	0.33	-0.1
2,007,239	-		CA265_RS08065	0.34	-0.2
2,007,239	-		CA265_RS08065	0.34	+1.0
2,007,242	-		CA265_RS08065	0.35	-1.0
2,007,253	-		CA265_RS08065	0.37	+0.1
2,007,307	+		CA265_RS08065	0.45	+0.1
2,007,307	+		CA265_RS08065	0.45	+0.3
2,007,457	-		CA265_RS08065	0.68	+0.9
2,007,457	-		CA265_RS08065	0.68	+0.5
2,007,459	+		CA265_RS08065	0.68	+0.4
2,007,484	-		CA265_RS08065	0.72	+0.9
2,007,509	-		CA265_RS08065	0.76	-0.9
2,007,539	-		CA265_RS08065	0.81	-0.9
2,007,615	+				-1.5
2,007,616	-				-0.4
2,007,616	-				+0.0
2,007,651	-				-0.3
2,007,683	+				-0.3
2,007,727	+				-1.5
2,007,728	-				-0.9
2,007,876	-		CA265_RS08070	0.42	-0.5
2,008,036	+				+0.5
2,008,079	-				+0.2
2,008,127	+		CA265_RS08075	0.11	+0.3
2,008,206	+		CA265_RS08075	0.19	-0.7
2,008,218	+		CA265_RS08075	0.20	-0.3
2,008,237	+		CA265_RS08075	0.22	-1.0
2,008,240	-		CA265_RS08075	0.22	-0.5
2,008,277	-		CA265_RS08075	0.26	+0.2
2,008,322	-		CA265_RS08075	0.30	+0.2
2,008,365	+		CA265_RS08075	0.35	+0.3
2,008,366	-		CA265_RS08075	0.35	-0.1
2,008,379	+		CA265_RS08075	0.36	-0.5
2,008,380	-		CA265_RS08075	0.36	+0.2
2,008,521	-		CA265_RS08075	0.50	+0.1
2,008,535	+		CA265_RS08075	0.52	-0.1
2,008,787	+		CA265_RS08075	0.77	+0.3
2,008,901	+		CA265_RS08075	0.89	-0.7
2,008,902	-		CA265_RS08075	0.89	-0.0
2,008,902	-		CA265_RS08075	0.89	+0.1
2,008,908	+		CA265_RS08075	0.89	-0.5