Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08060

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,005,650	+		CA265_RS08055	0.24	-0.0
2,005,650	+		CA265_RS08055	0.24	+0.3
2,005,742	+		CA265_RS08055	0.35	+0.3
2,005,742	+		CA265_RS08055	0.35	-0.4
2,005,747	-		CA265_RS08055	0.36	+1.1
2,005,748	+		CA265_RS08055	0.36	-0.7
2,005,748	+		CA265_RS08055	0.36	+1.1
2,005,760	+		CA265_RS08055	0.38	+0.5
2,005,879	+		CA265_RS08055	0.52	+0.3
2,005,979	-		CA265_RS08055	0.64	+0.0
2,006,007	-		CA265_RS08055	0.67	-0.6
2,006,007	-		CA265_RS08055	0.67	-0.1
2,006,075	+		CA265_RS08055	0.75	-0.4
2,006,140	-		CA265_RS08055	0.83	+0.3
2,006,141	+		CA265_RS08055	0.83	+0.7
2,006,294	-				+0.5
2,006,318	+				-0.3
2,006,351	-				+0.3
2,006,351	-				-0.3
2,006,354	-				+0.3
2,006,443	+				-0.5
2,006,444	-				+0.4
2,006,444	-				-0.5
2,006,450	-				+0.6
2,006,451	+				-0.4
2,006,455	+				+0.3
2,006,467	-				-0.3
2,006,512	-				-0.8
2,006,512	-				-2.5
2,006,630	-				+0.7
2,006,630	-				+0.0
2,006,633	-				-0.2
2,006,633	-				-0.8
2,006,642	+				-0.7
2,006,763	+		CA265_RS08060	0.41	-0.5
2,006,840	-		CA265_RS08060	0.66	-0.6
2,006,897	+		CA265_RS08060	0.84	-0.5
2,006,952	+				-0.2
2,006,990	+				-0.2
2,006,999	-				-0.0
2,006,999	-				+0.3
2,007,005	+				-0.6
2,007,006	-				-0.3
2,007,033	+				-0.3
2,007,034	-				+0.5
2,007,062	+				+0.0
2,007,063	-				-0.4
2,007,072	+				+0.1
2,007,073	-				+0.8
2,007,102	-		CA265_RS08065	0.13	-0.8
2,007,102	-		CA265_RS08065	0.13	-0.8
2,007,130	-		CA265_RS08065	0.18	-0.5
2,007,230	-		CA265_RS08065	0.33	-0.1
2,007,239	-		CA265_RS08065	0.34	-0.2
2,007,239	-		CA265_RS08065	0.34	+1.0
2,007,242	-		CA265_RS08065	0.35	-1.0
2,007,253	-		CA265_RS08065	0.37	+0.1
2,007,307	+		CA265_RS08065	0.45	+0.1
2,007,307	+		CA265_RS08065	0.45	+0.3
2,007,457	-		CA265_RS08065	0.68	+0.9
2,007,457	-		CA265_RS08065	0.68	+0.5
2,007,459	+		CA265_RS08065	0.68	+0.4
2,007,484	-		CA265_RS08065	0.72	+0.9
2,007,509	-		CA265_RS08065	0.76	-0.9
2,007,539	-		CA265_RS08065	0.81	-0.9
2,007,615	+				-1.5
2,007,616	-				-0.4
2,007,616	-				+0.0
2,007,651	-				-0.3
2,007,683	+				-0.3
2,007,727	+				-1.5
2,007,728	-				-0.9
2,007,876	-		CA265_RS08070	0.42	-0.5