Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS07610

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
1,907,977	+		CA265_RS07600	0.82	+0.3
1,907,978	-		CA265_RS07600	0.82	-0.1
1,907,987	-		CA265_RS07600	0.83	+0.5
1,907,989	-		CA265_RS07600	0.83	+0.6
1,907,992	+		CA265_RS07600	0.84	-0.2
1,908,006	-		CA265_RS07600	0.85	+0.5
1,908,018	-		CA265_RS07600	0.87	+1.0
1,908,073	+				-1.8
1,908,076	-				-0.3
1,908,116	+				+0.1
1,908,144	+				-0.9
1,908,187	-		CA265_RS07605	0.10	-0.7
1,908,187	-		CA265_RS07605	0.10	-0.1
1,908,215	+		CA265_RS07605	0.16	+0.1
1,908,215	+		CA265_RS07605	0.16	+0.1
1,908,216	-		CA265_RS07605	0.16	-1.1
1,908,216	-		CA265_RS07605	0.16	+0.3
1,908,249	+		CA265_RS07605	0.22	-0.0
1,908,305	+		CA265_RS07605	0.32	-0.3
1,908,316	-		CA265_RS07605	0.34	+0.1
1,908,348	+		CA265_RS07605	0.40	-1.9
1,908,352	-		CA265_RS07605	0.41	-0.4
1,908,427	+		CA265_RS07605	0.55	+0.2
1,908,428	-		CA265_RS07605	0.55	+0.3
1,908,428	-		CA265_RS07605	0.55	-0.6
1,908,437	+		CA265_RS07605	0.57	+0.9
1,908,535	-		CA265_RS07605	0.75	+0.7
1,908,567	+		CA265_RS07605	0.80	-0.5
1,908,567	+		CA265_RS07605	0.80	+0.9
1,908,568	-		CA265_RS07605	0.81	-0.1
1,908,568	-		CA265_RS07605	0.81	-0.4
1,908,671	-				-0.3
1,908,679	+				+0.9
1,908,680	-				-0.4
1,908,713	+				-0.5
1,908,713	+				-0.5
1,908,713	+				+0.9
1,908,722	-				-0.4
1,908,746	-				-0.1
1,908,770	+				-0.7
1,908,814	-				+0.1
1,908,816	+				-0.6
1,908,825	-				+0.2
1,908,825	-				+0.6
1,908,835	-				+0.4
1,908,835	-				-2.1
1,908,967	-				-1.0
1,909,019	-		CA265_RS07610	0.25	-1.1
1,909,019	-		CA265_RS07610	0.25	-0.9
1,909,144	+		CA265_RS07610	0.86	+0.1
1,909,171	+				+0.5
1,909,182	+				+0.4
1,909,183	-				-0.4
1,909,185	-				+0.4
1,909,185	-				+0.4
1,909,302	+		CA265_RS07615	0.23	-1.7
1,909,302	+		CA265_RS07615	0.23	+0.2
1,909,303	-		CA265_RS07615	0.23	+0.9
1,909,341	+		CA265_RS07615	0.33	-0.1
1,909,342	-		CA265_RS07615	0.33	-0.2
1,909,434	+		CA265_RS07615	0.57	-0.3
1,909,544	-		CA265_RS07615	0.86	+0.5
1,909,577	+				-0.2
1,909,581	-				-0.0
1,909,584	+				+0.4
1,909,672	-				+0.3
1,909,681	-				-0.4
1,909,691	+				-0.2
1,909,724	+		CA265_RS07620	0.10	+0.3
1,909,725	-		CA265_RS07620	0.11	-0.1
1,909,730	+		CA265_RS07620	0.13	-0.8
1,909,756	-		CA265_RS07620	0.27	+0.7
1,909,824	+		CA265_RS07620	0.63	-1.3
1,909,839	-		CA265_RS07620	0.71	-0.2
1,909,877	-				-0.6
1,909,892	-				+1.3
1,909,892	-				-0.3
1,909,913	-				+0.4
1,909,917	+				-0.5
1,909,917	+				+0.1
1,910,026	-				+0.0
1,910,055	+		CA265_RS07625	0.16	-1.2
1,910,069	+		CA265_RS07625	0.23	+0.0
1,910,070	-		CA265_RS07625	0.24	+0.2
1,910,090	-		CA265_RS07625	0.34	+0.2