Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06535

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
1,612,227	-		CA265_RS06530	0.51	+0.2
1,612,227	-		CA265_RS06530	0.51	-0.6
1,612,227	-		CA265_RS06530	0.51	-0.1
1,612,296	-		CA265_RS06530	0.56	+0.4
1,612,308	+		CA265_RS06530	0.57	-0.1
1,612,308	+		CA265_RS06530	0.57	-0.0
1,612,310	+		CA265_RS06530	0.57	-2.4
1,612,311	-		CA265_RS06530	0.57	+0.4
1,612,389	-		CA265_RS06530	0.63	+0.7
1,612,447	+		CA265_RS06530	0.68	+0.6
1,612,448	-		CA265_RS06530	0.68	+0.5
1,612,450	-		CA265_RS06530	0.68	-0.8
1,612,451	+		CA265_RS06530	0.68	-0.6
1,612,535	-		CA265_RS06530	0.75	+2.4
1,612,646	+		CA265_RS06530	0.83	+0.2
1,612,657	+		CA265_RS06530	0.84	-0.9
1,612,685	+		CA265_RS06530	0.86	-0.9
1,612,733	+		CA265_RS06530	0.90	-1.8
1,612,757	+				-2.1
1,612,758	-				-0.1
1,612,767	+				-0.2
1,612,768	-				+0.4
1,612,809	+				-0.2
1,612,837	-				-0.5
1,612,869	-				-0.4
1,612,892	+				+0.3
1,612,892	+				+0.6
1,612,920	-				-0.3
1,612,928	+				-0.2
1,613,002	+				-0.1
1,613,062	-				+0.1
1,613,062	-				-0.2
1,613,072	-				+0.6
1,613,156	+				+0.2
1,613,157	-				+0.0
1,613,168	+				-0.3
1,613,169	-				-0.4
1,613,169	-				+0.0
1,613,170	+				-0.4
1,613,195	-				+1.7
1,613,200	-				+0.1
1,613,207	+				+0.2
1,613,292	+				-0.1
1,613,294	+				+0.2
1,613,301	+				+0.8
1,613,366	+				+0.1
1,613,374	-		CA265_RS06535	0.16	+0.0
1,613,394	-		CA265_RS06535	0.19	+0.2
1,613,455	+		CA265_RS06535	0.25	+0.2
1,613,529	+		CA265_RS06535	0.32	-0.2
1,613,593	+		CA265_RS06535	0.39	+0.1
1,613,593	+		CA265_RS06535	0.39	+0.5
1,613,593	+		CA265_RS06535	0.39	+0.2
1,613,654	-		CA265_RS06535	0.45	+0.5
1,613,803	-		CA265_RS06535	0.61	-0.5
1,613,978	+		CA265_RS06535	0.79	+0.7
1,613,979	-				+1.7
1,613,985	+		CA265_RS06535	0.79	+0.8
1,614,094	+				-0.1
1,614,184	-				-0.9
1,614,188	+				-0.2
1,614,194	+				+1.0
1,614,194	+				-0.2
1,614,194	+				-0.4
1,614,229	-				-0.4
1,614,251	-				-0.2
1,614,267	-				+0.1
1,614,305	+				+0.1
1,614,306	-				-0.5
1,614,333	-				-0.3
1,614,361	-				-0.3
1,614,400	-				-0.4
1,614,441	-		CA265_RS06540	0.11	-0.4
1,614,442	+		CA265_RS06540	0.11	-0.9
1,614,443	-		CA265_RS06540	0.11	+0.3
1,614,468	-		CA265_RS06540	0.12	-0.3
1,614,481	+		CA265_RS06540	0.13	+0.1
1,614,578	+		CA265_RS06540	0.18	-0.1
1,614,579	-		CA265_RS06540	0.18	-1.0
1,614,699	+		CA265_RS06540	0.24	-0.5
1,614,706	+		CA265_RS06540	0.24	+0.1
1,614,708	+		CA265_RS06540	0.24	+0.1
1,614,750	+		CA265_RS06540	0.27	+0.2
1,614,808	-		CA265_RS06540	0.29	-0.1
1,614,845	+		CA265_RS06540	0.31	-0.1
1,614,846	-		CA265_RS06540	0.31	-1.6
1,614,876	+		CA265_RS06540	0.33	+0.0
1,614,921	+		CA265_RS06540	0.35	-0.6
1,614,922	-		CA265_RS06540	0.35	-0.1
1,614,922	-		CA265_RS06540	0.35	+0.1
1,614,938	+		CA265_RS06540	0.36	-0.2
1,614,939	-		CA265_RS06540	0.36	-0.0
1,614,939	-		CA265_RS06540	0.36	-0.8
1,614,983	+		CA265_RS06540	0.38	+0.2
1,615,118	-		CA265_RS06540	0.45	+0.8
1,615,123	-		CA265_RS06540	0.46	-1.4
1,615,153	+		CA265_RS06540	0.47	-0.2
1,615,157	-		CA265_RS06540	0.47	-0.8