Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05890

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
1,446,220	+		CA265_RS05885	0.50	-0.6
1,446,221	-		CA265_RS05885	0.50	-0.6
1,446,353	-		CA265_RS05885	0.60	+0.1
1,446,356	+		CA265_RS05885	0.61	+0.5
1,446,396	+		CA265_RS05885	0.64	+0.0
1,446,397	-		CA265_RS05885	0.64	+0.5
1,446,403	-		CA265_RS05885	0.64	+0.2
1,446,403	-		CA265_RS05885	0.64	+0.4
1,446,520	+		CA265_RS05885	0.74	-0.2
1,446,521	-		CA265_RS05885	0.74	-0.1
1,446,572	-		CA265_RS05885	0.78	-0.1
1,446,572	-		CA265_RS05885	0.78	+0.5
1,446,611	-		CA265_RS05885	0.81	+0.2
1,446,615	+		CA265_RS05885	0.81	+0.3
1,446,615	+		CA265_RS05885	0.81	-0.4
1,446,634	+		CA265_RS05885	0.83	-1.2
1,446,635	-		CA265_RS05885	0.83	+1.4
1,446,727	-				+0.1
1,446,837	-				-1.0
1,446,849	-				+0.2
1,446,849	-				-0.8
1,446,852	-				-1.3
1,446,903	+				-0.1
1,446,926	-				-0.1
1,446,941	-				+0.4
1,446,945	+				+0.5
1,447,011	+				-0.1
1,447,011	+				+1.3
1,447,012	-				-0.0
1,447,012	-				+0.2
1,447,158	+				+0.8
1,447,158	+				+0.6
1,447,159	-				-0.0
1,447,257	-		CA265_RS05890	0.16	+0.1
1,447,288	+		CA265_RS05890	0.20	+1.5
1,447,347	-		CA265_RS05890	0.27	+0.0
1,447,348	+		CA265_RS05890	0.28	+0.1
1,447,436	+		CA265_RS05890	0.38	+0.1
1,447,436	+		CA265_RS05890	0.38	-0.1
1,447,436	+		CA265_RS05890	0.38	+0.4
1,447,466	+		CA265_RS05890	0.42	-0.4
1,447,466	+		CA265_RS05890	0.42	+0.2
1,447,489	-		CA265_RS05890	0.45	+0.2
1,447,501	+		CA265_RS05890	0.46	+0.4
1,447,525	-		CA265_RS05890	0.49	+0.1
1,447,526	+		CA265_RS05890	0.49	+0.9
1,447,527	-		CA265_RS05890	0.50	+1.3
1,447,530	+		CA265_RS05890	0.50	-0.4
1,447,703	+		CA265_RS05890	0.71	+2.1
1,447,703	+		CA265_RS05890	0.71	-0.3
1,447,749	-		CA265_RS05890	0.77	-0.3
1,447,749	-		CA265_RS05890	0.77	-1.9
1,447,753	+		CA265_RS05890	0.77	+0.8
1,447,753	+		CA265_RS05890	0.77	+1.9
1,447,769	-		CA265_RS05890	0.79	+0.2
1,447,815	+		CA265_RS05890	0.85	+0.7
1,447,838	-		CA265_RS05890	0.88	+0.9
1,447,876	+				+0.3
1,447,964	-				-0.8
1,447,968	+				+1.0
1,447,968	+				-0.4
1,447,972	+				-0.4
1,447,973	-				-0.4
1,448,129	+				+0.4
1,448,129	+				-0.3
1,448,130	-				-0.2
1,448,130	-				-0.9
1,448,137	+				+0.3
1,448,142	+				-0.3
1,448,143	-				+0.1
1,448,228	-		CA265_RS05895	0.12	+0.6
1,448,302	+		CA265_RS05895	0.17	+0.4
1,448,386	-		CA265_RS05895	0.23	+0.4
1,448,386	-		CA265_RS05895	0.23	+0.3
1,448,388	+		CA265_RS05895	0.23	-1.4
1,448,388	+		CA265_RS05895	0.23	-0.5
1,448,389	-		CA265_RS05895	0.23	-0.8
1,448,529	-		CA265_RS05895	0.33	-0.1
1,448,529	-		CA265_RS05895	0.33	-1.0
1,448,545	-		CA265_RS05895	0.34	-0.2
1,448,621	-		CA265_RS05895	0.40	+0.3
1,448,632	-		CA265_RS05895	0.40	-0.6
1,448,648	-		CA265_RS05895	0.41	-0.7
1,448,648	-		CA265_RS05895	0.41	-0.2
1,448,710	-		CA265_RS05895	0.46	+0.1
1,448,710	-		CA265_RS05895	0.46	-0.3
1,448,722	-		CA265_RS05895	0.47	+0.3
1,448,811	+		CA265_RS05895	0.53	-0.3
1,448,849	-		CA265_RS05895	0.56	-0.1
1,448,852	+		CA265_RS05895	0.56	+0.4
1,448,907	+		CA265_RS05895	0.60	+0.2
1,448,907	+		CA265_RS05895	0.60	+0.4
1,448,909	+		CA265_RS05895	0.60	+0.6
1,448,909	+		CA265_RS05895	0.60	-0.5
1,448,909	+		CA265_RS05895	0.60	+0.4
1,448,910	-		CA265_RS05895	0.60	+0.2