Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04665

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
1,113,876	-				-0.5
1,113,876	-				-0.4
1,113,889	-				+1.1
1,113,890	+				+0.1
1,113,968	-				-1.1
1,113,968	-				-0.4
1,114,121	+		CA265_RS04660	0.14	+0.5
1,114,126	-		CA265_RS04660	0.14	-1.0
1,114,172	+		CA265_RS04660	0.22	-1.1
1,114,173	-		CA265_RS04660	0.22	+0.1
1,114,174	+		CA265_RS04660	0.22	+0.0
1,114,178	+		CA265_RS04660	0.23	-1.6
1,114,179	-		CA265_RS04660	0.23	+0.2
1,114,179	-		CA265_RS04660	0.23	+0.1
1,114,229	+		CA265_RS04660	0.31	+0.3
1,114,330	-		CA265_RS04660	0.47	-0.3
1,114,402	+		CA265_RS04660	0.58	-0.1
1,114,402	+		CA265_RS04660	0.58	+0.0
1,114,403	-		CA265_RS04660	0.58	-0.3
1,114,421	+		CA265_RS04660	0.61	+0.3
1,114,458	-		CA265_RS04660	0.67	-0.2
1,114,521	-		CA265_RS04660	0.77	-0.1
1,114,560	-		CA265_RS04660	0.83	+0.8
1,114,562	+		CA265_RS04660	0.84	-0.3
1,114,562	+		CA265_RS04660	0.84	+0.7
1,114,582	+		CA265_RS04660	0.87	+0.0
1,114,583	-		CA265_RS04660	0.87	+0.4
1,114,583	-		CA265_RS04660	0.87	-0.0
1,114,616	+				-0.1
1,114,617	-				+0.2
1,114,617	-				+1.0
1,114,638	+				-0.6
1,114,638	+				-1.3
1,114,639	-				+0.1
1,114,662	+				-0.2
1,114,668	-				+0.3
1,114,668	-				-0.2
1,114,671	+				+0.1
1,114,681	-				-0.4
1,114,758	-				+0.6
1,114,768	+				-1.0
1,114,817	-				+0.0
1,114,821	-				-0.1
1,114,825	-				+1.2
1,114,847	+				-0.5
1,114,848	-				-0.7
1,114,848	-				+0.0
1,114,897	+				+0.1
1,114,908	-		CA265_RS04665	0.11	-1.0
1,114,908	-		CA265_RS04665	0.11	-0.1
1,115,093	+		CA265_RS04665	0.34	+0.4
1,115,216	-		CA265_RS04665	0.50	-0.2
1,115,248	-		CA265_RS04665	0.54	-1.6
1,115,250	+		CA265_RS04665	0.55	-1.3
1,115,266	+		CA265_RS04665	0.57	-1.5
1,115,266	+		CA265_RS04665	0.57	-0.4
1,115,292	+		CA265_RS04665	0.60	-0.5
1,115,293	-		CA265_RS04665	0.60	-1.1
1,115,342	+		CA265_RS04665	0.66	+0.2
1,115,427	+		CA265_RS04665	0.77	+0.8
1,115,427	+		CA265_RS04665	0.77	-0.3
1,115,444	+		CA265_RS04665	0.79	-0.6
1,115,498	-		CA265_RS04665	0.86	-0.3
1,115,580	-				+0.4
1,115,591	+				+0.2
1,115,606	-				-0.1
1,115,627	+				-0.3
1,115,629	+				+0.2
1,115,629	+				+0.3
1,115,681	-				-0.4
1,115,719	-				-0.1
1,115,804	-				-0.1
1,115,812	-				+0.5
1,115,834	+				-0.5
1,115,877	+				-1.0
1,115,878	-				+0.1
1,115,920	-				-0.9
1,115,920	-				+0.0
1,115,954	+				+0.6
1,115,955	-				+0.5
1,115,962	+				+0.5
1,115,972	+				+0.2
1,115,973	-				-0.4
1,116,080	+		CA265_RS04670	0.13	-0.2
1,116,162	-		CA265_RS04670	0.18	-0.2
1,116,167	+		CA265_RS04670	0.18	+0.4
1,116,233	+		CA265_RS04670	0.22	-0.2
1,116,255	-		CA265_RS04670	0.24	+0.1
1,116,255	-		CA265_RS04670	0.24	+0.8
1,116,383	-		CA265_RS04670	0.31	-2.0
1,116,434	+		CA265_RS04670	0.35	+0.6
1,116,435	-		CA265_RS04670	0.35	+0.3
1,116,523	+		CA265_RS04670	0.40	-0.8