Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS00105 and CA265_RS00110 are separated by 131 nucleotides CA265_RS00110 and CA265_RS00115 are separated by 187 nucleotides CA265_RS00115 and CA265_RS00120 are separated by 134 nucleotides
CA265_RS00105: CA265_RS00105 - 23S ribosomal RNA, at 20,713 to 23,592
_RS00105
CA265_RS00110: CA265_RS00110 - 5S ribosomal RNA, at 23,724 to 23,835
_RS00110
CA265_RS00115: CA265_RS00115 - hypothetical protein, at 24,023 to 24,244
_RS00115
CA265_RS00120: CA265_RS00120 - peptidase S8, at 24,379 to 26,148
_RS00120
Position (kb) 24
25 Strain fitness (log2 ratio) -2
-1
0
1 at 24.074 kb on + strand, within CA265_RS00115 at 24.074 kb on + strand, within CA265_RS00115 at 24.074 kb on + strand, within CA265_RS00115 at 24.074 kb on + strand, within CA265_RS00115 at 24.074 kb on + strand, within CA265_RS00115 at 24.091 kb on + strand, within CA265_RS00115 at 24.151 kb on + strand, within CA265_RS00115 at 24.152 kb on - strand, within CA265_RS00115 at 24.165 kb on + strand, within CA265_RS00115 at 24.214 kb on + strand, within CA265_RS00115 at 24.253 kb on + strand at 24.266 kb on - strand at 24.277 kb on + strand at 24.282 kb on - strand at 24.351 kb on - strand at 24.358 kb on + strand at 24.364 kb on + strand at 24.364 kb on + strand at 24.373 kb on - strand at 24.376 kb on - strand at 24.591 kb on - strand, within CA265_RS00120 at 24.626 kb on + strand, within CA265_RS00120 at 24.627 kb on - strand, within CA265_RS00120 at 24.733 kb on - strand, within CA265_RS00120 at 24.852 kb on + strand, within CA265_RS00120 at 24.859 kb on + strand, within CA265_RS00120 at 24.862 kb on - strand, within CA265_RS00120 at 24.910 kb on - strand, within CA265_RS00120 at 24.944 kb on + strand, within CA265_RS00120 at 24.993 kb on + strand, within CA265_RS00120 at 25.003 kb on + strand, within CA265_RS00120 at 25.006 kb on - strand, within CA265_RS00120 at 25.108 kb on + strand, within CA265_RS00120 at 25.136 kb on - strand, within CA265_RS00120 at 25.192 kb on - strand, within CA265_RS00120
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Dimethyl Sulfoxide 7.5 vol% remove 24,074 + CA265_RS00115 0.23 +0.5 24,074 + CA265_RS00115 0.23 -0.9 24,074 + CA265_RS00115 0.23 -0.7 24,074 + CA265_RS00115 0.23 +0.3 24,074 + CA265_RS00115 0.23 -0.9 24,091 + CA265_RS00115 0.31 -0.2 24,151 + CA265_RS00115 0.58 -1.7 24,152 - CA265_RS00115 0.58 -0.5 24,165 + CA265_RS00115 0.64 -1.2 24,214 + CA265_RS00115 0.86 +0.5 24,253 + -0.1 24,266 - -0.9 24,277 + -0.4 24,282 - -0.0 24,351 - -0.2 24,358 + -1.4 24,364 + -0.7 24,364 + -0.3 24,373 - -0.2 24,376 - -1.0 24,591 - CA265_RS00120 0.12 -0.9 24,626 + CA265_RS00120 0.14 +1.4 24,627 - CA265_RS00120 0.14 -0.2 24,733 - CA265_RS00120 0.20 -0.9 24,852 + CA265_RS00120 0.27 +0.3 24,859 + CA265_RS00120 0.27 -0.4 24,862 - CA265_RS00120 0.27 +0.7 24,910 - CA265_RS00120 0.30 +0.3 24,944 + CA265_RS00120 0.32 -0.3 24,993 + CA265_RS00120 0.35 -1.8 25,003 + CA265_RS00120 0.35 +1.2 25,006 - CA265_RS00120 0.35 -2.6 25,108 + CA265_RS00120 0.41 +0.3 25,136 - CA265_RS00120 0.43 +0.8 25,192 - CA265_RS00120 0.46 +0.2
Or see this region's nucleotide sequence