Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_722 and Ac3H11_723 are separated by 15 nucleotides Ac3H11_723 and Ac3H11_724 are separated by 79 nucleotides Ac3H11_724 and Ac3H11_725 are separated by 133 nucleotides
Ac3H11_722 - Arginyl-tRNA synthetase (EC 6.1.1.19), at 11,708 to 13,429
_722
Ac3H11_723 - Cell division protein FtsN, at 13,445 to 14,107
_723
Ac3H11_724 - Periplasmic thiol:disulfide interchange protein DsbA, at 14,187 to 14,834
_724
Ac3H11_725 - LptA, protein essential for LPS transport across the periplasm, at 14,968 to 15,624
_725
Position (kb) 13
14
15 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 13.427 kb on + strand at 13.427 kb on + strand at 13.428 kb on - strand at 13.428 kb on - strand at 13.428 kb on - strand at 13.438 kb on + strand at 13.438 kb on + strand at 13.880 kb on + strand, within Ac3H11_723 at 13.880 kb on + strand, within Ac3H11_723 at 13.880 kb on + strand, within Ac3H11_723 at 13.881 kb on - strand, within Ac3H11_723 at 13.881 kb on - strand, within Ac3H11_723 at 14.171 kb on + strand at 14.171 kb on + strand at 14.171 kb on + strand at 14.171 kb on + strand at 14.833 kb on - strand at 14.833 kb on - strand at 14.833 kb on - strand at 14.833 kb on - strand at 14.833 kb on - strand at 14.941 kb on + strand at 14.941 kb on + strand at 14.941 kb on + strand at 14.941 kb on + strand at 14.942 kb on - strand at 14.942 kb on - strand at 14.942 kb on - strand at 14.942 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 13,427 + +0.1 13,427 + -2.7 13,428 - -1.4 13,428 - +1.2 13,428 - -1.3 13,438 + -1.3 13,438 + +0.4 13,880 + Ac3H11_723 0.66 +0.6 13,880 + Ac3H11_723 0.66 +1.3 13,880 + Ac3H11_723 0.66 -0.3 13,881 - Ac3H11_723 0.66 +1.1 13,881 - Ac3H11_723 0.66 +2.0 14,171 + +0.4 14,171 + -0.8 14,171 + -4.0 14,171 + -0.1 14,833 - +0.7 14,833 - +1.0 14,833 - +1.2 14,833 - -0.9 14,833 - -1.7 14,941 + +1.9 14,941 + +0.5 14,941 + -3.3 14,941 + -0.3 14,942 - -1.3 14,942 - +2.2 14,942 - +1.0 14,942 - -1.2
Or see this region's nucleotide sequence