Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4990

Experiment: Zinc 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_4989 and Ac3H11_4990 are separated by 218 nucleotidesAc3H11_4990 and Ac3H11_4991 are separated by 16 nucleotidesAc3H11_4991 and Ac3H11_4992 are separated by 78 nucleotides Ac3H11_4989 - Enoyl-CoA hydratase (EC 4.2.1.17), at 153,836 to 154,636 _4989 Ac3H11_4990 - Pirin, at 154,855 to 155,604 _4990 Ac3H11_4991 - Cation transport protein chaC, at 155,621 to 156,364 _4991 Ac3H11_4992 - hypothetical protein, at 156,443 to 158,449 _4992 Position (kb) 154 155 156Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 154.214 kb on + strand, within Ac3H11_4989at 154.214 kb on + strand, within Ac3H11_4989at 154.214 kb on + strand, within Ac3H11_4989at 154.215 kb on - strand, within Ac3H11_4989at 154.253 kb on + strand, within Ac3H11_4989at 154.253 kb on + strand, within Ac3H11_4989at 154.254 kb on - strand, within Ac3H11_4989at 154.254 kb on - strand, within Ac3H11_4989at 154.472 kb on + strand, within Ac3H11_4989at 154.726 kb on - strandat 154.790 kb on + strandat 154.790 kb on + strandat 154.791 kb on - strandat 154.791 kb on - strandat 154.791 kb on - strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.799 kb on + strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.800 kb on - strandat 154.939 kb on + strand, within Ac3H11_4990at 154.940 kb on - strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.053 kb on + strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.054 kb on - strand, within Ac3H11_4990at 155.284 kb on + strand, within Ac3H11_4990at 155.284 kb on + strand, within Ac3H11_4990at 155.284 kb on + strand, within Ac3H11_4990at 155.285 kb on - strand, within Ac3H11_4990at 155.285 kb on - strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.458 kb on + strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.459 kb on - strand, within Ac3H11_4990at 155.603 kb on - strandat 155.852 kb on + strand, within Ac3H11_4991at 155.852 kb on + strand, within Ac3H11_4991at 155.852 kb on + strand, within Ac3H11_4991at 155.853 kb on - strand, within Ac3H11_4991at 155.853 kb on - strand, within Ac3H11_4991at 155.853 kb on - strand, within Ac3H11_4991at 156.102 kb on - strand, within Ac3H11_4991at 156.102 kb on - strand, within Ac3H11_4991at 156.102 kb on - strand, within Ac3H11_4991at 156.263 kb on + strand, within Ac3H11_4991at 156.264 kb on - strand, within Ac3H11_4991at 156.264 kb on - strand, within Ac3H11_4991at 156.264 kb on - strand, within Ac3H11_4991at 156.264 kb on - strand, within Ac3H11_4991at 156.314 kb on + strandat 156.314 kb on + strandat 156.314 kb on + strandat 156.314 kb on + strandat 156.314 kb on + strandat 156.314 kb on + strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.315 kb on - strandat 156.327 kb on + strandat 156.327 kb on + strandat 156.327 kb on + strandat 156.328 kb on - strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.329 kb on + strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.330 kb on - strandat 156.365 kb on + strandat 156.365 kb on + strandat 156.399 kb on + strandat 156.400 kb on - strandat 156.400 kb on - strandat 156.400 kb on - strandat 156.491 kb on + strandat 156.491 kb on + strandat 156.491 kb on + strandat 156.491 kb on + strandat 156.492 kb on - strandat 156.492 kb on - strandat 156.492 kb on - strandat 156.530 kb on + strandat 156.530 kb on + strandat 156.530 kb on + strandat 156.530 kb on + strandat 156.531 kb on - strandat 156.531 kb on - strandat 156.531 kb on - strandat 156.531 kb on - strandat 156.531 kb on - strandat 156.531 kb on - strandat 156.604 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Zinc 1 mM
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154,214 + Ac3H11_4989 0.47 -0.8
154,214 + Ac3H11_4989 0.47 -0.8
154,214 + Ac3H11_4989 0.47 +0.3
154,215 - Ac3H11_4989 0.47 -0.5
154,253 + Ac3H11_4989 0.52 -0.1
154,253 + Ac3H11_4989 0.52 -0.3
154,254 - Ac3H11_4989 0.52 -0.4
154,254 - Ac3H11_4989 0.52 -1.3
154,472 + Ac3H11_4989 0.79 -0.3
154,726 - +0.5
154,790 + -0.9
154,790 + -0.5
154,791 - -0.5
154,791 - -2.1
154,791 - -1.1
154,799 + -0.9
154,799 + -1.5
154,799 + +0.0
154,799 + -1.5
154,799 + +0.0
154,799 + +0.9
154,799 + -0.6
154,799 + -0.1
154,799 + +0.2
154,800 - -1.4
154,800 - -0.3
154,800 - +1.3
154,800 - -1.0
154,800 - -0.1
154,800 - +0.6
154,800 - -0.1
154,939 + Ac3H11_4990 0.11 +0.8
154,940 - Ac3H11_4990 0.11 +0.4
155,053 + Ac3H11_4990 0.26 -0.8
155,053 + Ac3H11_4990 0.26 -1.2
155,053 + Ac3H11_4990 0.26 +0.9
155,053 + Ac3H11_4990 0.26 -0.4
155,053 + Ac3H11_4990 0.26 +0.4
155,053 + Ac3H11_4990 0.26 +0.6
155,053 + Ac3H11_4990 0.26 +0.5
155,053 + Ac3H11_4990 0.26 -0.5
155,053 + Ac3H11_4990 0.26 -0.6
155,053 + Ac3H11_4990 0.26 -0.4
155,053 + Ac3H11_4990 0.26 +0.4
155,054 - Ac3H11_4990 0.27 +0.3
155,054 - Ac3H11_4990 0.27 -0.6
155,054 - Ac3H11_4990 0.27 +1.4
155,054 - Ac3H11_4990 0.27 -2.1
155,054 - Ac3H11_4990 0.27 -0.4
155,054 - Ac3H11_4990 0.27 +0.2
155,054 - Ac3H11_4990 0.27 +0.8
155,054 - Ac3H11_4990 0.27 -1.0
155,054 - Ac3H11_4990 0.27 -1.8
155,054 - Ac3H11_4990 0.27 +0.4
155,054 - Ac3H11_4990 0.27 -0.7
155,284 + Ac3H11_4990 0.57 +0.1
155,284 + Ac3H11_4990 0.57 -0.3
155,284 + Ac3H11_4990 0.57 -1.6
155,285 - Ac3H11_4990 0.57 +1.5
155,285 - Ac3H11_4990 0.57 -1.2
155,458 + Ac3H11_4990 0.80 +0.9
155,458 + Ac3H11_4990 0.80 +0.1
155,458 + Ac3H11_4990 0.80 -0.3
155,458 + Ac3H11_4990 0.80 +1.2
155,458 + Ac3H11_4990 0.80 -0.6
155,458 + Ac3H11_4990 0.80 -0.7
155,458 + Ac3H11_4990 0.80 -1.4
155,458 + Ac3H11_4990 0.80 -1.8
155,458 + Ac3H11_4990 0.80 +0.3
155,458 + Ac3H11_4990 0.80 +0.9
155,459 - Ac3H11_4990 0.81 -1.6
155,459 - Ac3H11_4990 0.81 +0.3
155,459 - Ac3H11_4990 0.81 +1.5
155,459 - Ac3H11_4990 0.81 +0.4
155,459 - Ac3H11_4990 0.81 +1.8
155,459 - Ac3H11_4990 0.81 -0.8
155,459 - Ac3H11_4990 0.81 +1.5
155,459 - Ac3H11_4990 0.81 +0.5
155,459 - Ac3H11_4990 0.81 -0.1
155,603 - -0.4
155,852 + Ac3H11_4991 0.31 +1.1
155,852 + Ac3H11_4991 0.31 -1.1
155,852 + Ac3H11_4991 0.31 +2.3
155,853 - Ac3H11_4991 0.31 +0.4
155,853 - Ac3H11_4991 0.31 -2.1
155,853 - Ac3H11_4991 0.31 -0.0
156,102 - Ac3H11_4991 0.65 -2.1
156,102 - Ac3H11_4991 0.65 -1.6
156,102 - Ac3H11_4991 0.65 +1.2
156,263 + Ac3H11_4991 0.86 -0.5
156,264 - Ac3H11_4991 0.86 -1.2
156,264 - Ac3H11_4991 0.86 +0.7
156,264 - Ac3H11_4991 0.86 +1.4
156,264 - Ac3H11_4991 0.86 +0.1
156,314 + -0.4
156,314 + -0.7
156,314 + -0.4
156,314 + -0.2
156,314 + +0.2
156,314 + -0.0
156,315 - -2.8
156,315 - -1.5
156,315 - +0.3
156,315 - +1.3
156,315 - +0.0
156,315 - -2.3
156,315 - -0.3
156,315 - -0.3
156,315 - -0.0
156,315 - -0.4
156,315 - +0.8
156,315 - -0.8
156,315 - +0.2
156,315 - -0.7
156,315 - +0.4
156,327 + -1.5
156,327 + +0.8
156,327 + -0.1
156,328 - -0.5
156,329 + -0.5
156,329 + +0.9
156,329 + -0.6
156,329 + +0.3
156,329 + +0.3
156,329 + -0.4
156,329 + -2.1
156,329 + +0.8
156,329 + +0.2
156,329 + -0.5
156,329 + -1.5
156,329 + -1.8
156,329 + +0.1
156,329 + -1.1
156,330 - +0.7
156,330 - -1.7
156,330 - +0.9
156,330 - +1.3
156,330 - +0.3
156,330 - +1.0
156,330 - -0.4
156,330 - -0.4
156,330 - +0.9
156,330 - +0.7
156,330 - -2.7
156,330 - -0.4
156,330 - -0.9
156,330 - +0.0
156,330 - +1.0
156,330 - -1.1
156,330 - +0.6
156,330 - +0.9
156,330 - -1.2
156,365 + -0.8
156,365 + -0.3
156,399 + -0.4
156,400 - -1.6
156,400 - -0.6
156,400 - -0.1
156,491 + -1.3
156,491 + +1.0
156,491 + +0.2
156,491 + +0.1
156,492 - +1.7
156,492 - -0.5
156,492 - +0.1
156,530 + -0.3
156,530 + -2.0
156,530 + +1.1
156,530 + -1.7
156,531 - -1.4
156,531 - +0.5
156,531 - +0.4
156,531 - -3.6
156,531 - +0.1
156,531 - +1.1
156,604 + -1.6

Or see this region's nucleotide sequence