Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4743 and Ac3H11_4744 are separated by 6 nucleotides Ac3H11_4744 and Ac3H11_4745 are separated by 4 nucleotides Ac3H11_4745 and Ac3H11_4746 overlap by 26 nucleotides Ac3H11_4746 and Ac3H11_4747 overlap by 6 nucleotides
Ac3H11_4743 - Outer membrane stress sensor protease DegS, at 47,263 to 48,423
_4743
Ac3H11_4744 - hypothetical protein, at 48,430 to 48,552
_4744
Ac3H11_4745 - FIG137478: Hypothetical protein YbgI, at 48,557 to 49,324
_4745
Ac3H11_4746 - hypothetical protein, at 49,299 to 49,454
_4746
Ac3H11_4747 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 49,449 to 50,477
_4747
Position (kb) 49
50 Strain fitness (log2 ratio) -2
-1
0
1
2 at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.438 kb on - strand at 48.848 kb on + strand, within Ac3H11_4745 at 49.112 kb on + strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.113 kb on - strand, within Ac3H11_4745 at 49.343 kb on + strand, within Ac3H11_4746 at 49.343 kb on + strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.344 kb on - strand, within Ac3H11_4746 at 49.361 kb on + strand, within Ac3H11_4746 at 49.362 kb on - strand, within Ac3H11_4746
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 48,438 - -2.4 48,438 - +0.6 48,438 - -0.3 48,438 - -1.8 48,438 - -0.9 48,438 - -1.9 48,438 - -0.2 48,438 - +1.0 48,848 + Ac3H11_4745 0.38 -0.4 49,112 + Ac3H11_4745 0.72 +2.1 49,113 - Ac3H11_4745 0.72 -0.9 49,113 - Ac3H11_4745 0.72 -0.1 49,113 - Ac3H11_4745 0.72 +2.6 49,343 + Ac3H11_4746 0.28 -0.4 49,343 + Ac3H11_4746 0.28 -0.1 49,344 - Ac3H11_4746 0.29 -0.8 49,344 - Ac3H11_4746 0.29 -0.9 49,361 + Ac3H11_4746 0.40 -0.3 49,362 - Ac3H11_4746 0.40 +0.8
Or see this region's nucleotide sequence