Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2786

Experiment: Zinc 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2785 and Ac3H11_2786 are separated by 128 nucleotides Ac3H11_2785 - GCN5-related N-acetyltransferase, at 1,090,097 to 1,090,618 _2785 Ac3H11_2786 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 1,090,747 to 1,091,589 _2786 Position (kb) 1090 1091 1092Strain fitness (log2 ratio) -2 -1 0 1 2at 1089.752 kb on - strandat 1089.805 kb on - strandat 1089.850 kb on + strandat 1089.850 kb on + strandat 1089.988 kb on + strandat 1089.988 kb on + strandat 1089.988 kb on + strandat 1089.989 kb on - strandat 1089.989 kb on - strandat 1089.989 kb on - strandat 1090.035 kb on - strandat 1090.140 kb on + strandat 1090.141 kb on - strandat 1090.191 kb on + strand, within Ac3H11_2785at 1090.251 kb on + strand, within Ac3H11_2785at 1090.251 kb on + strand, within Ac3H11_2785at 1090.251 kb on + strand, within Ac3H11_2785at 1090.252 kb on - strand, within Ac3H11_2785at 1090.252 kb on - strand, within Ac3H11_2785at 1090.580 kb on + strandat 1090.581 kb on - strandat 1090.624 kb on - strandat 1090.632 kb on + strandat 1090.632 kb on + strandat 1090.632 kb on + strandat 1090.632 kb on + strandat 1090.633 kb on - strandat 1090.683 kb on - strandat 1090.683 kb on - strandat 1090.712 kb on - strandat 1090.712 kb on - strandat 1090.868 kb on - strand, within Ac3H11_2786at 1090.871 kb on + strand, within Ac3H11_2786at 1090.942 kb on + strand, within Ac3H11_2786at 1090.942 kb on + strand, within Ac3H11_2786at 1091.021 kb on + strand, within Ac3H11_2786at 1091.206 kb on + strand, within Ac3H11_2786at 1091.306 kb on + strand, within Ac3H11_2786at 1091.306 kb on + strand, within Ac3H11_2786at 1091.307 kb on - strand, within Ac3H11_2786at 1091.307 kb on - strand, within Ac3H11_2786at 1091.308 kb on + strand, within Ac3H11_2786at 1091.308 kb on + strand, within Ac3H11_2786at 1091.308 kb on + strand, within Ac3H11_2786at 1091.308 kb on + strandat 1091.309 kb on - strand, within Ac3H11_2786at 1091.614 kb on + strandat 1091.615 kb on - strandat 1091.661 kb on - strandat 1091.661 kb on - strandat 1091.661 kb on - strandat 1091.779 kb on + strandat 1091.780 kb on - strandat 1091.780 kb on - strandat 1091.891 kb on + strandat 1091.999 kb on - strandat 1091.999 kb on - strandat 1091.999 kb on - strandat 1092.030 kb on - strandat 1092.033 kb on + strandat 1092.033 kb on + strandat 1092.033 kb on + strandat 1092.034 kb on - strandat 1092.056 kb on + strandat 1092.056 kb on + strandat 1092.056 kb on + strandat 1092.057 kb on - strandat 1092.057 kb on - strandat 1092.057 kb on - strandat 1092.057 kb on - strandat 1092.076 kb on - strandat 1092.076 kb on - strandat 1092.082 kb on - strandat 1092.082 kb on - strandat 1092.140 kb on - strandat 1092.262 kb on + strandat 1092.345 kb on + strandat 1092.345 kb on + strandat 1092.365 kb on + strandat 1092.426 kb on + strandat 1092.426 kb on + strandat 1092.426 kb on + strandat 1092.426 kb on + strandat 1092.426 kb on + strandat 1092.426 kb on + strandat 1092.427 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Zinc 1 mM
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1,089,752 - +0.2
1,089,805 - +0.7
1,089,850 + +0.5
1,089,850 + +0.1
1,089,988 + +0.5
1,089,988 + -2.7
1,089,988 + -0.0
1,089,989 - +0.3
1,089,989 - +0.9
1,089,989 - -1.9
1,090,035 - -1.2
1,090,140 + -0.5
1,090,141 - -1.5
1,090,191 + Ac3H11_2785 0.18 -0.9
1,090,251 + Ac3H11_2785 0.30 -1.2
1,090,251 + Ac3H11_2785 0.30 +0.3
1,090,251 + Ac3H11_2785 0.30 +0.3
1,090,252 - Ac3H11_2785 0.30 +0.4
1,090,252 - Ac3H11_2785 0.30 -0.6
1,090,580 + +0.3
1,090,581 - -2.2
1,090,624 - -1.3
1,090,632 + -1.7
1,090,632 + -1.6
1,090,632 + -0.6
1,090,632 + +1.3
1,090,633 - +0.4
1,090,683 - +1.1
1,090,683 - +0.5
1,090,712 - -1.0
1,090,712 - -1.3
1,090,868 - Ac3H11_2786 0.14 +0.6
1,090,871 + Ac3H11_2786 0.15 -0.7
1,090,942 + Ac3H11_2786 0.23 +0.3
1,090,942 + Ac3H11_2786 0.23 +0.2
1,091,021 + Ac3H11_2786 0.33 -1.3
1,091,206 + Ac3H11_2786 0.54 -0.5
1,091,306 + Ac3H11_2786 0.66 -0.5
1,091,306 + Ac3H11_2786 0.66 +0.9
1,091,307 - Ac3H11_2786 0.66 +0.3
1,091,307 - Ac3H11_2786 0.66 -0.2
1,091,308 + Ac3H11_2786 0.67 +0.7
1,091,308 + Ac3H11_2786 0.67 -2.3
1,091,308 + Ac3H11_2786 0.67 +0.9
1,091,308 + +0.3
1,091,309 - Ac3H11_2786 0.67 +1.0
1,091,614 + -2.7
1,091,615 - +0.0
1,091,661 - -0.7
1,091,661 - -1.2
1,091,661 - -0.5
1,091,779 + -1.0
1,091,780 - +0.6
1,091,780 - -1.7
1,091,891 + -1.3
1,091,999 - -1.0
1,091,999 - -1.5
1,091,999 - -0.6
1,092,030 - -0.0
1,092,033 + +0.2
1,092,033 + -1.7
1,092,033 + -1.0
1,092,034 - +1.9
1,092,056 + +0.9
1,092,056 + +1.3
1,092,056 + -0.5
1,092,057 - +1.1
1,092,057 - +0.1
1,092,057 - +0.5
1,092,057 - -0.5
1,092,076 - -0.7
1,092,076 - -0.6
1,092,082 - +0.3
1,092,082 - -0.7
1,092,140 - -2.3
1,092,262 + -1.3
1,092,345 + -0.2
1,092,345 + -0.9
1,092,365 + +0.1
1,092,426 + +0.1
1,092,426 + -0.0
1,092,426 + -2.0
1,092,426 + +0.8
1,092,426 + +0.1
1,092,426 + -0.2
1,092,427 - -0.9

Or see this region's nucleotide sequence