Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_187

Experiment: Zinc 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_187 and Ac3H11_188 are separated by 41 nucleotides Ac3H11_187 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 77,647 to 78,045 _187 Ac3H11_188 - Methyl-accepting chemotaxis protein, at 78,087 to 79,448 _188 Position (kb) 77 78 79Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 76.744 kb on + strandat 76.744 kb on + strandat 76.745 kb on - strandat 76.745 kb on - strandat 76.824 kb on - strandat 76.884 kb on + strandat 76.885 kb on - strandat 76.980 kb on - strandat 77.013 kb on + strandat 77.013 kb on + strandat 77.072 kb on - strandat 77.072 kb on - strandat 77.079 kb on + strandat 77.079 kb on + strandat 77.080 kb on - strandat 77.114 kb on + strandat 77.114 kb on + strandat 77.115 kb on - strandat 77.115 kb on - strandat 77.115 kb on - strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.182 kb on + strandat 77.183 kb on - strandat 77.183 kb on - strandat 77.183 kb on - strandat 77.183 kb on - strandat 77.183 kb on - strandat 77.183 kb on - strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.184 kb on + strandat 77.185 kb on - strandat 77.185 kb on - strandat 77.185 kb on - strandat 77.190 kb on + strandat 77.190 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.279 kb on + strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.280 kb on - strandat 77.313 kb on + strandat 77.314 kb on - strandat 77.427 kb on - strandat 77.434 kb on + strandat 77.434 kb on + strandat 77.435 kb on - strandat 77.435 kb on - strandat 77.582 kb on + strandat 78.043 kb on + strandat 78.043 kb on + strandat 78.043 kb on + strandat 78.044 kb on - strandat 78.044 kb on - strandat 78.044 kb on - strandat 78.044 kb on - strandat 78.107 kb on + strandat 78.108 kb on - strandat 78.108 kb on - strandat 78.117 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.156 kb on + strandat 78.157 kb on - strandat 78.157 kb on - strandat 78.157 kb on - strandat 78.157 kb on - strandat 78.158 kb on + strandat 78.158 kb on + strandat 78.166 kb on + strandat 78.321 kb on + strand, within Ac3H11_188at 78.321 kb on + strand, within Ac3H11_188at 78.321 kb on + strand, within Ac3H11_188at 78.321 kb on + strand, within Ac3H11_188at 78.321 kb on + strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.322 kb on - strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.325 kb on + strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.326 kb on - strand, within Ac3H11_188at 78.372 kb on + strand, within Ac3H11_188at 78.372 kb on + strand, within Ac3H11_188at 78.372 kb on + strand, within Ac3H11_188at 78.373 kb on - strand, within Ac3H11_188at 78.395 kb on + strand, within Ac3H11_188at 78.395 kb on + strand, within Ac3H11_188at 78.395 kb on + strand, within Ac3H11_188at 78.395 kb on + strand, within Ac3H11_188at 78.396 kb on - strand, within Ac3H11_188at 78.396 kb on - strand, within Ac3H11_188at 78.409 kb on + strand, within Ac3H11_188at 78.409 kb on + strand, within Ac3H11_188at 78.409 kb on + strand, within Ac3H11_188at 78.409 kb on + strand, within Ac3H11_188at 78.409 kb on + strand, within Ac3H11_188at 78.410 kb on - strand, within Ac3H11_188at 78.410 kb on - strand, within Ac3H11_188at 78.410 kb on - strand, within Ac3H11_188at 78.410 kb on - strand, within Ac3H11_188at 78.420 kb on + strand, within Ac3H11_188at 78.420 kb on + strand, within Ac3H11_188at 78.420 kb on + strand, within Ac3H11_188at 78.421 kb on - strand, within Ac3H11_188at 78.421 kb on - strand, within Ac3H11_188at 78.421 kb on - strand, within Ac3H11_188at 78.479 kb on + strand, within Ac3H11_188at 78.504 kb on - strand, within Ac3H11_188at 78.615 kb on + strand, within Ac3H11_188at 78.617 kb on + strand, within Ac3H11_188at 78.617 kb on + strand, within Ac3H11_188at 78.617 kb on + strand, within Ac3H11_188at 78.617 kb on + strand, within Ac3H11_188at 78.618 kb on - strand, within Ac3H11_188at 78.618 kb on - strand, within Ac3H11_188at 78.618 kb on - strand, within Ac3H11_188at 78.631 kb on + strand, within Ac3H11_188at 78.631 kb on + strand, within Ac3H11_188at 78.631 kb on + strand, within Ac3H11_188at 78.631 kb on + strand, within Ac3H11_188at 78.631 kb on + strand, within Ac3H11_188at 78.670 kb on + strand, within Ac3H11_188at 78.670 kb on + strand, within Ac3H11_188at 78.671 kb on - strand, within Ac3H11_188at 78.738 kb on + strand, within Ac3H11_188at 78.738 kb on + strand, within Ac3H11_188at 78.738 kb on + strand, within Ac3H11_188at 78.738 kb on + strand, within Ac3H11_188at 78.739 kb on - strand, within Ac3H11_188at 78.739 kb on - strand, within Ac3H11_188at 78.752 kb on + strand, within Ac3H11_188at 78.752 kb on + strand, within Ac3H11_188at 78.753 kb on - strand, within Ac3H11_188at 78.776 kb on - strand, within Ac3H11_188at 78.786 kb on + strand, within Ac3H11_188at 78.786 kb on + strand, within Ac3H11_188at 78.787 kb on - strand, within Ac3H11_188at 78.787 kb on - strand, within Ac3H11_188at 78.787 kb on - strand, within Ac3H11_188at 78.787 kb on - strand, within Ac3H11_188at 78.787 kb on - strand, within Ac3H11_188at 78.812 kb on + strand, within Ac3H11_188at 78.819 kb on + strand, within Ac3H11_188at 78.819 kb on + strand, within Ac3H11_188at 78.820 kb on - strand, within Ac3H11_188at 78.820 kb on - strand, within Ac3H11_188at 78.898 kb on + strand, within Ac3H11_188at 78.910 kb on + strand, within Ac3H11_188at 78.947 kb on + strand, within Ac3H11_188at 78.947 kb on + strand, within Ac3H11_188at 78.947 kb on + strand, within Ac3H11_188at 78.948 kb on - strand, within Ac3H11_188at 78.948 kb on - strand, within Ac3H11_188at 78.948 kb on - strand, within Ac3H11_188at 78.948 kb on - strand, within Ac3H11_188at 78.964 kb on + strand, within Ac3H11_188at 79.016 kb on - strand, within Ac3H11_188at 79.034 kb on + strand, within Ac3H11_188at 79.035 kb on - strand, within Ac3H11_188at 79.035 kb on - strand, within Ac3H11_188

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Per-strain Table

Position Strand Gene LocusTag Fraction Zinc 1 mM
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76,744 + -0.5
76,744 + +0.3
76,745 - -0.5
76,745 - +0.1
76,824 - -0.4
76,884 + +0.5
76,885 - -0.5
76,980 - +0.8
77,013 + -0.7
77,013 + -0.4
77,072 - +1.1
77,072 - -0.7
77,079 + +0.8
77,079 + -2.8
77,080 - -0.2
77,114 + +1.4
77,114 + +1.9
77,115 - -1.3
77,115 - -0.4
77,115 - -2.0
77,182 + -0.1
77,182 + +0.3
77,182 + -0.4
77,182 + +0.1
77,182 + -0.8
77,182 + +0.2
77,182 + +0.5
77,182 + +0.3
77,183 - -0.3
77,183 - -0.8
77,183 - +1.4
77,183 - -1.0
77,183 - +0.8
77,183 - +0.7
77,184 + -0.4
77,184 + -0.8
77,184 + +1.0
77,184 + +0.4
77,184 + -3.2
77,184 + -0.9
77,184 + +0.0
77,184 + +0.7
77,185 - -0.7
77,185 - -2.3
77,185 - -2.3
77,190 + -0.6
77,190 + +0.5
77,279 + -1.2
77,279 + +0.5
77,279 + +0.0
77,279 + -0.1
77,279 + -1.0
77,279 + -0.2
77,279 + +0.5
77,279 + -1.3
77,279 + +0.6
77,279 + -0.4
77,280 - -1.7
77,280 - -1.4
77,280 - -0.5
77,280 - +0.9
77,280 - -0.5
77,280 - -0.3
77,280 - -0.5
77,280 - +0.2
77,280 - +0.4
77,280 - -0.6
77,280 - +1.3
77,280 - +0.0
77,280 - +0.6
77,280 - +0.7
77,280 - -0.8
77,280 - -0.3
77,280 - -1.6
77,280 - -0.8
77,313 + +1.9
77,314 - +0.2
77,427 - -1.5
77,434 + +1.0
77,434 + -0.6
77,435 - +0.8
77,435 - -0.2
77,582 + -2.0
78,043 + +1.6
78,043 + -1.0
78,043 + -0.9
78,044 - -2.2
78,044 - +1.3
78,044 - +0.3
78,044 - +0.6
78,107 + +0.2
78,108 - +2.3
78,108 - -2.0
78,117 + -1.1
78,156 + -1.3
78,156 + +0.2
78,156 + +1.1
78,156 + +0.0
78,156 + -0.8
78,156 + +1.1
78,156 + -0.4
78,157 - -0.7
78,157 - +0.2
78,157 - -0.1
78,157 - -3.2
78,158 + -2.4
78,158 + -1.1
78,166 + -2.5
78,321 + Ac3H11_188 0.17 -2.0
78,321 + Ac3H11_188 0.17 +1.7
78,321 + Ac3H11_188 0.17 -1.8
78,321 + Ac3H11_188 0.17 -0.7
78,321 + Ac3H11_188 0.17 -1.0
78,322 - Ac3H11_188 0.17 +0.4
78,322 - Ac3H11_188 0.17 -0.2
78,322 - Ac3H11_188 0.17 -0.2
78,322 - Ac3H11_188 0.17 -2.3
78,322 - Ac3H11_188 0.17 +0.5
78,322 - Ac3H11_188 0.17 +0.4
78,322 - Ac3H11_188 0.17 -0.3
78,325 + Ac3H11_188 0.17 -0.5
78,325 + Ac3H11_188 0.17 +1.2
78,325 + Ac3H11_188 0.17 -1.6
78,325 + Ac3H11_188 0.17 -0.6
78,325 + Ac3H11_188 0.17 -0.6
78,325 + Ac3H11_188 0.17 -0.6
78,325 + Ac3H11_188 0.17 +0.4
78,325 + Ac3H11_188 0.17 +1.1
78,325 + Ac3H11_188 0.17 -1.1
78,326 - Ac3H11_188 0.18 -2.4
78,326 - Ac3H11_188 0.18 +0.7
78,326 - Ac3H11_188 0.18 -1.4
78,326 - Ac3H11_188 0.18 +0.5
78,326 - Ac3H11_188 0.18 -1.3
78,326 - Ac3H11_188 0.18 +0.6
78,326 - Ac3H11_188 0.18 +0.7
78,326 - Ac3H11_188 0.18 -3.4
78,372 + Ac3H11_188 0.21 +0.0
78,372 + Ac3H11_188 0.21 -0.8
78,372 + Ac3H11_188 0.21 +0.6
78,373 - Ac3H11_188 0.21 -1.0
78,395 + Ac3H11_188 0.23 +2.3
78,395 + Ac3H11_188 0.23 +0.3
78,395 + Ac3H11_188 0.23 -1.6
78,395 + Ac3H11_188 0.23 +1.1
78,396 - Ac3H11_188 0.23 -1.3
78,396 - Ac3H11_188 0.23 +1.0
78,409 + Ac3H11_188 0.24 +0.1
78,409 + Ac3H11_188 0.24 -1.4
78,409 + Ac3H11_188 0.24 -0.3
78,409 + Ac3H11_188 0.24 -0.7
78,409 + Ac3H11_188 0.24 +0.3
78,410 - Ac3H11_188 0.24 +0.4
78,410 - Ac3H11_188 0.24 +0.8
78,410 - Ac3H11_188 0.24 -0.8
78,410 - Ac3H11_188 0.24 -0.2
78,420 + Ac3H11_188 0.24 -0.1
78,420 + Ac3H11_188 0.24 -0.4
78,420 + Ac3H11_188 0.24 -1.7
78,421 - Ac3H11_188 0.25 -1.0
78,421 - Ac3H11_188 0.25 -1.7
78,421 - Ac3H11_188 0.25 -0.9
78,479 + Ac3H11_188 0.29 +0.3
78,504 - Ac3H11_188 0.31 +1.4
78,615 + Ac3H11_188 0.39 -0.3
78,617 + Ac3H11_188 0.39 +0.1
78,617 + Ac3H11_188 0.39 -2.0
78,617 + Ac3H11_188 0.39 -1.8
78,617 + Ac3H11_188 0.39 +0.7
78,618 - Ac3H11_188 0.39 -0.5
78,618 - Ac3H11_188 0.39 +0.2
78,618 - Ac3H11_188 0.39 +0.8
78,631 + Ac3H11_188 0.40 -0.6
78,631 + Ac3H11_188 0.40 -0.1
78,631 + Ac3H11_188 0.40 -2.1
78,631 + Ac3H11_188 0.40 +0.1
78,631 + Ac3H11_188 0.40 -1.5
78,670 + Ac3H11_188 0.43 +1.3
78,670 + Ac3H11_188 0.43 +0.4
78,671 - Ac3H11_188 0.43 +1.1
78,738 + Ac3H11_188 0.48 +0.5
78,738 + Ac3H11_188 0.48 -0.1
78,738 + Ac3H11_188 0.48 +1.1
78,738 + Ac3H11_188 0.48 +2.9
78,739 - Ac3H11_188 0.48 +0.3
78,739 - Ac3H11_188 0.48 -0.8
78,752 + Ac3H11_188 0.49 +0.8
78,752 + Ac3H11_188 0.49 -0.6
78,753 - Ac3H11_188 0.49 +1.6
78,776 - Ac3H11_188 0.51 +0.0
78,786 + Ac3H11_188 0.51 +1.1
78,786 + Ac3H11_188 0.51 -0.1
78,787 - Ac3H11_188 0.51 +1.8
78,787 - Ac3H11_188 0.51 -1.1
78,787 - Ac3H11_188 0.51 +1.8
78,787 - Ac3H11_188 0.51 -0.4
78,787 - Ac3H11_188 0.51 -1.0
78,812 + Ac3H11_188 0.53 -0.2
78,819 + Ac3H11_188 0.54 -2.2
78,819 + Ac3H11_188 0.54 +0.2
78,820 - Ac3H11_188 0.54 +0.3
78,820 - Ac3H11_188 0.54 -2.1
78,898 + Ac3H11_188 0.60 +0.4
78,910 + Ac3H11_188 0.60 +0.4
78,947 + Ac3H11_188 0.63 +0.4
78,947 + Ac3H11_188 0.63 -0.5
78,947 + Ac3H11_188 0.63 -1.1
78,948 - Ac3H11_188 0.63 -2.9
78,948 - Ac3H11_188 0.63 +1.2
78,948 - Ac3H11_188 0.63 -0.2
78,948 - Ac3H11_188 0.63 +1.0
78,964 + Ac3H11_188 0.64 -2.6
79,016 - Ac3H11_188 0.68 -2.0
79,034 + Ac3H11_188 0.70 +0.6
79,035 - Ac3H11_188 0.70 -0.2
79,035 - Ac3H11_188 0.70 -2.5

Or see this region's nucleotide sequence