Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32430 and AZOBR_RS32435 are separated by 7 nucleotides AZOBR_RS32435 and AZOBR_RS32440 are separated by 202 nucleotides
AZOBR_RS32430: AZOBR_RS32430 - cysteine synthase, at 641,001 to 642,152
_RS32430
AZOBR_RS32435: AZOBR_RS32435 - dfrA, at 642,160 to 642,537
_RS32435
AZOBR_RS32440: AZOBR_RS32440 - ArsR family transcriptional regulator, at 642,740 to 643,213
_RS32440
Position (kb) 642
643 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 641.404 kb on + strand, within AZOBR_RS32430 at 641.405 kb on - strand, within AZOBR_RS32430 at 641.405 kb on - strand, within AZOBR_RS32430 at 641.626 kb on + strand, within AZOBR_RS32430 at 641.668 kb on + strand, within AZOBR_RS32430 at 641.669 kb on - strand, within AZOBR_RS32430 at 641.669 kb on - strand, within AZOBR_RS32430 at 641.669 kb on - strand, within AZOBR_RS32430 at 641.795 kb on - strand, within AZOBR_RS32430 at 641.795 kb on - strand, within AZOBR_RS32430 at 641.795 kb on - strand, within AZOBR_RS32430 at 641.944 kb on + strand, within AZOBR_RS32430 at 642.263 kb on + strand, within AZOBR_RS32435 at 642.263 kb on + strand, within AZOBR_RS32435 at 642.264 kb on - strand, within AZOBR_RS32435 at 642.264 kb on - strand, within AZOBR_RS32435 at 642.264 kb on - strand, within AZOBR_RS32435 at 642.264 kb on - strand, within AZOBR_RS32435 at 642.264 kb on - strand, within AZOBR_RS32435 at 642.305 kb on + strand, within AZOBR_RS32435 at 642.306 kb on - strand, within AZOBR_RS32435 at 642.306 kb on - strand, within AZOBR_RS32435 at 642.306 kb on - strand, within AZOBR_RS32435 at 642.306 kb on - strand, within AZOBR_RS32435 at 642.488 kb on + strand, within AZOBR_RS32435 at 642.489 kb on - strand, within AZOBR_RS32435 at 642.489 kb on - strand, within AZOBR_RS32435 at 642.875 kb on + strand, within AZOBR_RS32440 at 642.875 kb on + strand, within AZOBR_RS32440 at 642.875 kb on + strand, within AZOBR_RS32440 at 642.875 kb on + strand, within AZOBR_RS32440 at 642.876 kb on - strand, within AZOBR_RS32440 at 642.876 kb on - strand, within AZOBR_RS32440 at 643.049 kb on + strand, within AZOBR_RS32440 at 643.195 kb on - strand at 643.220 kb on - strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.425 kb on + strand at 643.426 kb on - strand at 643.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 641,404 + AZOBR_RS32430 0.35 +0.4 641,405 - AZOBR_RS32430 0.35 -0.3 641,405 - AZOBR_RS32430 0.35 -0.2 641,626 + AZOBR_RS32430 0.54 -0.6 641,668 + AZOBR_RS32430 0.58 -0.6 641,669 - AZOBR_RS32430 0.58 +0.3 641,669 - AZOBR_RS32430 0.58 -0.0 641,669 - AZOBR_RS32430 0.58 -0.3 641,795 - AZOBR_RS32430 0.69 +1.6 641,795 - AZOBR_RS32430 0.69 -0.1 641,795 - AZOBR_RS32430 0.69 -0.1 641,944 + AZOBR_RS32430 0.82 -0.5 642,263 + AZOBR_RS32435 0.27 -0.2 642,263 + AZOBR_RS32435 0.27 +1.6 642,264 - AZOBR_RS32435 0.28 -2.2 642,264 - AZOBR_RS32435 0.28 +0.4 642,264 - AZOBR_RS32435 0.28 +1.0 642,264 - AZOBR_RS32435 0.28 +0.6 642,264 - AZOBR_RS32435 0.28 +1.1 642,305 + AZOBR_RS32435 0.38 +0.0 642,306 - AZOBR_RS32435 0.39 +0.4 642,306 - AZOBR_RS32435 0.39 +0.7 642,306 - AZOBR_RS32435 0.39 +0.2 642,306 - AZOBR_RS32435 0.39 +1.5 642,488 + AZOBR_RS32435 0.87 +0.7 642,489 - AZOBR_RS32435 0.87 +0.1 642,489 - AZOBR_RS32435 0.87 -1.7 642,875 + AZOBR_RS32440 0.28 -0.1 642,875 + AZOBR_RS32440 0.28 +0.1 642,875 + AZOBR_RS32440 0.28 -0.6 642,875 + AZOBR_RS32440 0.28 -0.1 642,876 - AZOBR_RS32440 0.29 +1.0 642,876 - AZOBR_RS32440 0.29 +0.7 643,049 + AZOBR_RS32440 0.65 -3.2 643,195 - -1.0 643,220 - +0.1 643,425 + -0.3 643,425 + +0.7 643,425 + +0.8 643,425 + -0.3 643,425 + -0.2 643,425 + +0.5 643,425 + +0.0 643,426 - -1.8 643,426 - +1.0
Or see this region's nucleotide sequence