Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17365 and AZOBR_RS17370 are separated by 519 nucleotides AZOBR_RS17370 and AZOBR_RS17375 are separated by 13 nucleotides AZOBR_RS17375 and AZOBR_RS17380 are separated by 26 nucleotides
AZOBR_RS17365: AZOBR_RS17365 - uracil-DNA glycosylase, at 639,808 to 640,689
_RS17365
AZOBR_RS17370: AZOBR_RS17370 - murein transglycosylase, at 641,209 to 643,167
_RS17370
AZOBR_RS17375: AZOBR_RS17375 - molybdopterin biosynthesis protein B, at 643,181 to 643,717
_RS17375
AZOBR_RS17380: AZOBR_RS17380 - aminoglycoside phosphotransferase, at 643,744 to 644,709
_RS17380
Position (kb) 641
642
643
644 Strain fitness (log2 ratio) -2
-1
0
1
2 at 641.410 kb on + strand, within AZOBR_RS17370 at 641.546 kb on - strand, within AZOBR_RS17370 at 641.546 kb on - strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.953 kb on + strand, within AZOBR_RS17370 at 641.954 kb on - strand, within AZOBR_RS17370 at 641.990 kb on - strand, within AZOBR_RS17370 at 641.990 kb on - strand, within AZOBR_RS17370 at 642.110 kb on - strand, within AZOBR_RS17370 at 642.277 kb on + strand, within AZOBR_RS17370 at 642.829 kb on + strand, within AZOBR_RS17370 at 642.830 kb on - strand, within AZOBR_RS17370 at 642.830 kb on - strand, within AZOBR_RS17370 at 643.000 kb on + strand at 643.000 kb on + strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.001 kb on - strand at 643.033 kb on + strand at 643.033 kb on + strand at 643.034 kb on - strand at 643.034 kb on - strand at 643.034 kb on - strand at 643.099 kb on + strand at 643.099 kb on + strand at 643.100 kb on - strand at 643.100 kb on - strand at 643.101 kb on + strand at 643.102 kb on - strand at 643.517 kb on + strand, within AZOBR_RS17375 at 643.518 kb on - strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.580 kb on + strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375 at 643.581 kb on - strand, within AZOBR_RS17375
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 641,410 + AZOBR_RS17370 0.10 +0.6 641,546 - AZOBR_RS17370 0.17 +0.6 641,546 - AZOBR_RS17370 0.17 +0.6 641,953 + AZOBR_RS17370 0.38 +0.4 641,953 + AZOBR_RS17370 0.38 +0.5 641,953 + AZOBR_RS17370 0.38 +0.7 641,954 - AZOBR_RS17370 0.38 +1.2 641,990 - AZOBR_RS17370 0.40 +0.0 641,990 - AZOBR_RS17370 0.40 +0.8 642,110 - AZOBR_RS17370 0.46 -1.0 642,277 + AZOBR_RS17370 0.55 +1.4 642,829 + AZOBR_RS17370 0.83 -1.7 642,830 - AZOBR_RS17370 0.83 +0.1 642,830 - AZOBR_RS17370 0.83 +0.1 643,000 + -0.1 643,000 + -0.3 643,001 - -0.4 643,001 - +1.1 643,001 - +1.3 643,001 - +0.9 643,033 + -1.2 643,033 + +0.6 643,034 - +1.9 643,034 - +0.7 643,034 - +0.4 643,099 + +0.5 643,099 + +0.3 643,100 - +1.1 643,100 - +1.2 643,101 + +0.7 643,102 - +0.8 643,517 + AZOBR_RS17375 0.63 -0.6 643,518 - AZOBR_RS17375 0.63 +0.4 643,580 + AZOBR_RS17375 0.74 +0.3 643,580 + AZOBR_RS17375 0.74 +0.1 643,580 + AZOBR_RS17375 0.74 +0.4 643,580 + AZOBR_RS17375 0.74 -0.2 643,580 + AZOBR_RS17375 0.74 +0.6 643,580 + AZOBR_RS17375 0.74 -1.4 643,580 + AZOBR_RS17375 0.74 +0.3 643,581 - AZOBR_RS17375 0.74 -2.0 643,581 - AZOBR_RS17375 0.74 +1.2 643,581 - AZOBR_RS17375 0.74 +0.9 643,581 - AZOBR_RS17375 0.74 +1.1
Or see this region's nucleotide sequence