Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02105 and AZOBR_RS02110 are separated by 22 nucleotides AZOBR_RS02110 and AZOBR_RS02115 are separated by 267 nucleotides AZOBR_RS02115 and AZOBR_RS02120 are separated by 58 nucleotides
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
AZOBR_RS02110: AZOBR_RS02110 - protein-PII uridylyltransferase, at 432,723 to 435,524
_RS02110
AZOBR_RS02115: AZOBR_RS02115 - hypothetical protein, at 435,792 to 436,103
_RS02115
AZOBR_RS02120: AZOBR_RS02120 - hypothetical protein, at 436,162 to 436,635
_RS02120
Position (kb) 432
433
434
435
436 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1 at 431.832 kb on + strand at 431.833 kb on + strand at 431.833 kb on - strand at 431.837 kb on - strand at 431.837 kb on - strand at 431.932 kb on + strand at 432.074 kb on - strand at 432.617 kb on + strand, within AZOBR_RS02105 at 432.702 kb on - strand at 432.702 kb on - strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.910 kb on + strand at 433.408 kb on + strand, within AZOBR_RS02110 at 433.409 kb on - strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.559 kb on - strand, within AZOBR_RS02110 at 433.729 kb on + strand, within AZOBR_RS02110 at 433.888 kb on + strand, within AZOBR_RS02110 at 433.889 kb on - strand, within AZOBR_RS02110 at 434.014 kb on + strand, within AZOBR_RS02110 at 434.014 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand, within AZOBR_RS02110 at 434.023 kb on + strand at 434.023 kb on + strand, within AZOBR_RS02110 at 434.024 kb on - strand, within AZOBR_RS02110 at 434.024 kb on - strand, within AZOBR_RS02110 at 434.024 kb on - strand, within AZOBR_RS02110 at 434.032 kb on + strand, within AZOBR_RS02110 at 434.221 kb on - strand, within AZOBR_RS02110 at 434.480 kb on - strand at 434.528 kb on - strand, within AZOBR_RS02110 at 434.716 kb on + strand, within AZOBR_RS02110 at 434.716 kb on + strand at 434.716 kb on + strand, within AZOBR_RS02110 at 434.717 kb on - strand at 434.717 kb on - strand, within AZOBR_RS02110 at 435.046 kb on + strand, within AZOBR_RS02110 at 435.046 kb on + strand, within AZOBR_RS02110 at 435.047 kb on - strand, within AZOBR_RS02110 at 435.055 kb on + strand, within AZOBR_RS02110 at 435.055 kb on + strand, within AZOBR_RS02110 at 435.056 kb on - strand at 435.056 kb on - strand, within AZOBR_RS02110 at 435.586 kb on + strand at 435.603 kb on + strand at 435.603 kb on + strand at 435.779 kb on + strand at 435.779 kb on + strand at 435.780 kb on - strand at 436.163 kb on + strand at 436.446 kb on - strand, within AZOBR_RS02120
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 431,832 + +0.2 431,833 + -0.3 431,833 - +0.6 431,837 - -0.7 431,837 - +0.9 431,932 + +0.6 432,074 - -0.6 432,617 + AZOBR_RS02105 0.85 +0.5 432,702 - +0.1 432,702 - +0.7 432,820 + -1.9 432,820 + -5.2 432,820 + -3.5 432,821 - -1.8 432,821 - -2.7 432,821 - -3.6 432,821 - -3.5 432,821 - -3.5 432,910 + -2.8 433,408 + AZOBR_RS02110 0.24 -2.0 433,409 - AZOBR_RS02110 0.24 -0.8 433,558 + AZOBR_RS02110 0.30 -4.2 433,558 + AZOBR_RS02110 0.30 -4.0 433,559 - AZOBR_RS02110 0.30 -3.2 433,729 + AZOBR_RS02110 0.36 -1.7 433,888 + AZOBR_RS02110 0.42 -1.1 433,889 - AZOBR_RS02110 0.42 -3.9 434,014 + AZOBR_RS02110 0.46 -5.4 434,014 + AZOBR_RS02110 0.46 -3.0 434,023 + AZOBR_RS02110 0.46 -3.7 434,023 + AZOBR_RS02110 0.46 -1.3 434,023 + AZOBR_RS02110 0.46 -5.0 434,023 + AZOBR_RS02110 0.46 -3.9 434,023 + AZOBR_RS02110 0.46 -3.8 434,023 + AZOBR_RS02110 0.46 -1.3 434,023 + -0.3 434,023 + AZOBR_RS02110 0.46 +0.7 434,024 - AZOBR_RS02110 0.46 -3.5 434,024 - AZOBR_RS02110 0.46 -5.1 434,024 - AZOBR_RS02110 0.46 -6.9 434,032 + AZOBR_RS02110 0.47 -0.3 434,221 - AZOBR_RS02110 0.53 -2.6 434,480 - +0.7 434,528 - AZOBR_RS02110 0.64 -1.9 434,716 + AZOBR_RS02110 0.71 -1.9 434,716 + -0.9 434,716 + AZOBR_RS02110 0.71 -0.9 434,717 - +0.7 434,717 - AZOBR_RS02110 0.71 -1.6 435,046 + AZOBR_RS02110 0.83 -0.9 435,046 + AZOBR_RS02110 0.83 -3.5 435,047 - AZOBR_RS02110 0.83 -1.3 435,055 + AZOBR_RS02110 0.83 -0.9 435,055 + AZOBR_RS02110 0.83 +0.7 435,056 - -0.9 435,056 - AZOBR_RS02110 0.83 -1.6 435,586 + +0.3 435,603 + -0.4 435,603 + -0.5 435,779 + +0.4 435,779 + -0.5 435,780 - -0.1 436,163 + -0.9 436,446 - AZOBR_RS02120 0.60 -0.1
Or see this region's nucleotide sequence