Strain Fitness in Shewanella loihica PV-4 around Shew_3329

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,971,707	-		Shew_3328	0.77	+0.1
3,971,836	+		Shew_3328	0.81	+0.9
3,971,936	-		Shew_3328	0.85	+0.2
3,971,946	-		Shew_3328	0.86	-1.1
3,972,289	-				+0.3
3,973,346	-		Shew_3329	0.40	-0.8
3,973,361	-		Shew_3329	0.41	+0.1
3,973,538	-		Shew_3329	0.50	+0.0
3,973,686	-		Shew_3329	0.58	-0.0
3,973,691	+		Shew_3329	0.58	+0.0
3,973,699	-		Shew_3329	0.58	-0.3
3,973,720	+		Shew_3329	0.59	-0.0
3,973,844	+		Shew_3329	0.66	-0.6
3,973,959	+		Shew_3329	0.72	-0.3
3,974,074	+		Shew_3329	0.78	+0.1
3,974,106	+		Shew_3329	0.79	-0.8
3,974,145	-		Shew_3329	0.81	-0.2
3,974,399	+				+0.1
3,974,413	-				+0.1
3,974,440	+				+0.2
3,974,448	-				+0.1
3,974,523	+				+0.1
3,974,531	-				+0.8
3,974,749	-				+1.4
3,974,749	-				+0.7
3,974,768	+				+0.8
3,975,105	-		Shew_3330	0.35	-0.3
3,975,213	+		Shew_3330	0.44	+0.2
3,975,454	-		Shew_3330	0.64	+0.4
3,975,454	-		Shew_3330	0.64	-0.0