Strain Fitness in Shewanella loihica PV-4 around Shew_R0107

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,883,278	-				-0.6
3,883,319	+				+0.3
3,883,362	+				+0.2
3,883,362	+				+1.9
3,883,362	+				+0.4
3,883,362	+				+0.4
3,883,362	+				+0.3
3,883,362	+				+0.3
3,883,363	+				+0.1
3,883,370	-				+0.6
3,883,370	-				+0.2
3,883,370	-				-0.4
3,883,370	-				+0.3
3,883,388	+				-0.6
3,883,388	+				+1.1
3,883,388	+				+0.5
3,883,388	+				-0.4
3,883,388	+				-0.0
3,883,388	+				+1.1
3,883,388	+				+0.4
3,883,388	+				-0.0
3,883,388	+				+0.2
3,883,388	+				+0.6
3,883,393	+				+0.9
3,883,395	+				+0.3
3,883,396	-				-0.1
3,883,396	-				-0.3
3,883,396	-				-0.5
3,883,396	-				+0.6
3,883,396	-				-0.3
3,883,396	-				+0.2
3,883,396	-				-0.1
3,883,396	-				+0.4
3,883,396	-				-1.3
3,883,396	-				+0.1
3,883,403	-				+0.3
3,883,407	+				+0.0
3,883,415	-				+0.6
3,883,456	-		Shew_3246	0.15	-0.3
3,883,481	-		Shew_3246	0.19	-0.1
3,883,809	+		Shew_3246	0.67	-0.0
3,883,855	+		Shew_3246	0.74	+0.2
3,883,863	-		Shew_3246	0.75	+0.2
3,883,946	-		Shew_3246	0.87	-0.3
3,883,951	-		Shew_3246	0.88	-0.2
3,884,000	-				+0.3
3,884,038	+				+0.1
3,884,046	-				+0.9
3,884,046	-				+0.2
3,884,105	-				+0.8
3,884,542	-				-0.7
3,884,888	+		Shew_3247	0.64	+0.7
3,885,097	-				-0.1
3,885,176	-		Shew_3248	0.18	-0.3
3,885,329	-		Shew_3248	0.43	+0.5