Strain Fitness in Shewanella loihica PV-4 around Shew_3004

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,566,662	+	fadE	Shew_3003	0.77	-0.1
3,566,672	+	fadE	Shew_3003	0.77	+0.1
3,566,770	+	fadE	Shew_3003	0.81	-0.2
3,566,954	+	fadE	Shew_3003	0.90	-0.1
3,567,056	-				+0.3
3,567,744	+		Shew_3004	0.15	+2.1
3,567,815	-		Shew_3004	0.24	+0.6
3,568,100	+		Shew_3004	0.63	+0.2
3,568,246	-		Shew_3004	0.82	+1.2
3,568,401	-				-0.9
3,568,642	+		Shew_3005	0.18	-1.4
3,568,642	+		Shew_3005	0.18	-0.1
3,568,784	+		Shew_3005	0.29	-0.3
3,568,784	+		Shew_3005	0.29	-0.0
3,568,805	+		Shew_3005	0.30	+0.6
3,569,098	-		Shew_3005	0.51	+0.3
3,569,225	+		Shew_3005	0.60	-0.4
3,569,225	+		Shew_3005	0.60	-0.3