Strain Fitness in Shewanella loihica PV-4 around Shew_1004

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,160,712	+				-0.8
1,161,339	-		Shew_1004	0.11	-1.6
1,161,357	+		Shew_1004	0.13	-1.5
1,161,468	+		Shew_1004	0.27	-3.5
1,161,771	+		Shew_1004	0.65	-2.0
1,161,782	+		Shew_1004	0.66	-1.1
1,161,789	+		Shew_1004	0.67	-2.6
1,162,025	+				+0.1
1,162,147	+				+0.8
1,162,155	-				-0.1
1,162,221	+		Shew_1005	0.17	+0.5
1,162,673	+		Shew_1005	0.71	+0.1
1,162,710	+		Shew_1005	0.76	+0.5
1,162,718	-		Shew_1005	0.77	-0.1
1,162,718	-		Shew_1005	0.77	-0.2
1,162,718	-		Shew_1005	0.77	+0.1
1,162,732	-		Shew_1005	0.79	-0.5