Strain Fitness in Shewanella loihica PV-4 around Shew_0049

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
58,445	-		Shew_0048	0.19	-0.0
58,649	-		Shew_0048	0.47	+0.3
58,759	+		Shew_0048	0.63	-0.4
58,834	-		Shew_0048	0.74	+0.5
58,897	+		Shew_0048	0.82	+0.2
58,902	+		Shew_0048	0.83	-0.6
58,969	+				-0.1
59,003	-				-0.3
59,464	+				+0.7
59,565	+		Shew_0049	0.10	-0.7
59,781	-		Shew_0049	0.24	-0.4
59,903	-		Shew_0049	0.32	-0.0
59,918	-		Shew_0049	0.33	-0.5
59,918	-		Shew_0049	0.33	-0.7
60,152	+		Shew_0049	0.48	+0.5
60,152	+		Shew_0049	0.48	-0.1
60,160	-		Shew_0049	0.48	+0.0
60,238	-		Shew_0049	0.53	+0.8
60,238	-		Shew_0049	0.53	-0.6
60,586	+		Shew_0049	0.75	-0.1
60,950	-				+0.5
60,950	-				+0.6
61,064	-				+0.2
61,187	+		Shew_0050	0.15	-0.4
61,198	-		Shew_0050	0.17	-0.4
61,204	-		Shew_0050	0.18	+0.2
61,308	+		Shew_0050	0.32	-1.8
61,473	-		Shew_0050	0.55	-0.1
61,513	+		Shew_0050	0.61	+0.7
61,572	+		Shew_0050	0.69	+0.2
61,599	+		Shew_0050	0.73	-0.7
61,616	+		Shew_0050	0.75	+0.0
61,616	+		Shew_0050	0.75	+0.0
61,736	-				-0.5
61,812	-				+0.0
61,921	+				+1.1