Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2595

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,676,392	+		Synpcc7942_2593	0.68	-2.8
2,676,400	-		Synpcc7942_2593	0.70	-0.1
2,676,409	-		Synpcc7942_2593	0.72	-3.6
2,676,433	+		Synpcc7942_2593	0.76	-4.0
2,676,435	+		Synpcc7942_2593	0.76	+0.8
2,676,441	-		Synpcc7942_2593	0.77	-3.1
2,676,477	+		Synpcc7942_2593	0.84	-3.5
2,676,477	+		Synpcc7942_2593	0.84	-2.2
2,676,477	+		Synpcc7942_2593	0.84	-0.7
2,676,485	-		Synpcc7942_2593	0.86	-2.8
2,676,498	+		Synpcc7942_2593	0.88	-0.8
2,676,514	+				-1.0
2,676,563	-				-3.4
2,676,583	-				+0.6
2,676,697	-				-0.7
2,676,743	-				-1.8
2,676,761	+				-2.3
2,676,783	+				-1.2
2,676,799	-				-3.3
2,676,843	+		Synpcc7942_2594	0.14	-1.0
2,676,848	-		Synpcc7942_2594	0.14	-2.4
2,676,879	+		Synpcc7942_2594	0.19	-3.2
2,676,885	+		Synpcc7942_2594	0.20	-0.1
2,676,912	+		Synpcc7942_2594	0.25	-1.9
2,676,920	-		Synpcc7942_2594	0.26	+2.5
2,676,947	-		Synpcc7942_2594	0.31	-3.2
2,676,985	-		Synpcc7942_2594	0.37	-0.2
2,676,995	-		Synpcc7942_2594	0.38	-0.5
2,677,001	-		Synpcc7942_2594	0.39	-2.5
2,677,001	-		Synpcc7942_2594	0.39	-1.6
2,677,048	+		Synpcc7942_2594	0.47	-2.8
2,677,073	+		Synpcc7942_2594	0.51	-1.8
2,677,085	-		Synpcc7942_2594	0.53	+0.5
2,677,121	+		Synpcc7942_2594	0.59	-0.5
2,677,121	+		Synpcc7942_2594	0.59	-2.8
2,677,121	+		Synpcc7942_2594	0.59	+0.2
2,677,129	-		Synpcc7942_2594	0.60	-2.4
2,677,166	+		Synpcc7942_2594	0.66	-2.8
2,677,167	+		Synpcc7942_2594	0.67	-1.9
2,677,244	-		Synpcc7942_2594	0.79	+0.6
2,677,253	+		Synpcc7942_2594	0.81	-2.0
2,677,253	+		Synpcc7942_2594	0.81	-2.2
2,677,254	-		Synpcc7942_2594	0.81	+1.8
2,677,268	-		Synpcc7942_2594	0.83	-2.6
2,677,289	-		Synpcc7942_2594	0.86	+0.7
2,677,301	+		Synpcc7942_2594	0.88	-0.8
2,677,314	-				-1.2
2,677,314	-				-1.1
2,677,314	-				-1.9
2,677,316	+				-2.6
2,677,323	-				-1.8
2,677,329	+				-1.7
2,677,374	+				-1.4
2,677,383	-				+4.0
2,677,400	+				-1.9
2,677,403	-				-2.4
2,677,405	+				-3.2
2,677,408	-				-2.0
2,677,444	-				-3.9
2,677,444	-				-0.3
2,677,482	+				+0.2
2,677,489	-				-2.6
2,677,503	+				-2.2
2,677,511	-				-0.1
2,677,526	-		Synpcc7942_2595	0.10	+0.2
2,677,535	-		Synpcc7942_2595	0.11	-2.6
2,677,595	+		Synpcc7942_2595	0.15	-1.5
2,677,600	+		Synpcc7942_2595	0.16	-0.3
2,677,605	+		Synpcc7942_2595	0.16	-1.6
2,677,610	+		Synpcc7942_2595	0.16	-1.8
2,677,613	+		Synpcc7942_2595	0.16	-3.6
2,677,613	-		Synpcc7942_2595	0.16	+0.5
2,677,618	-		Synpcc7942_2595	0.17	-1.3
2,677,623	+		Synpcc7942_2595	0.17	-0.1
2,677,643	+		Synpcc7942_2595	0.19	-1.8
2,677,646	-		Synpcc7942_2595	0.19	-0.8
2,677,651	-		Synpcc7942_2595	0.19	-4.7
2,677,658	+		Synpcc7942_2595	0.20	-1.5
2,677,701	+		Synpcc7942_2595	0.23	+0.5
2,677,742	+		Synpcc7942_2595	0.25	-3.2
2,677,757	+		Synpcc7942_2595	0.26	-0.1
2,677,757	+		Synpcc7942_2595	0.26	-2.9
2,677,762	+		Synpcc7942_2595	0.27	-1.8
2,677,765	-		Synpcc7942_2595	0.27	-1.0
2,677,774	+		Synpcc7942_2595	0.28	+0.8
2,677,781	+		Synpcc7942_2595	0.28	-2.4
2,677,789	-		Synpcc7942_2595	0.29	-1.3
2,677,789	-		Synpcc7942_2595	0.29	-2.7
2,677,789	-		Synpcc7942_2595	0.29	-2.2
2,677,824	-		Synpcc7942_2595	0.31	-2.2
2,677,824	-		Synpcc7942_2595	0.31	-1.3
2,677,826	+		Synpcc7942_2595	0.31	-2.3
2,677,829	-		Synpcc7942_2595	0.32	-2.8
2,677,834	-		Synpcc7942_2595	0.32	-1.2
2,677,845	+		Synpcc7942_2595	0.33	-0.7
2,677,850	+		Synpcc7942_2595	0.33	-2.9
2,677,853	-		Synpcc7942_2595	0.33	-3.9
2,677,853	-		Synpcc7942_2595	0.33	-3.4
2,677,853	-		Synpcc7942_2595	0.33	-0.3
2,677,853	-		Synpcc7942_2595	0.33	-2.7
2,677,853	-		Synpcc7942_2595	0.33	-2.1
2,677,858	-		Synpcc7942_2595	0.34	-2.4
2,677,858	-		Synpcc7942_2595	0.34	-2.1
2,677,863	-		Synpcc7942_2595	0.34	-1.3
2,677,869	+		Synpcc7942_2595	0.34	-1.3
2,677,932	-		Synpcc7942_2595	0.39	-4.1
2,677,949	+		Synpcc7942_2595	0.40	+0.9
2,677,967	-		Synpcc7942_2595	0.41	-3.7
2,677,973	+		Synpcc7942_2595	0.42	-1.4
2,677,973	+		Synpcc7942_2595	0.42	-0.1
2,677,978	-		Synpcc7942_2595	0.42	-0.7
2,677,978	-		Synpcc7942_2595	0.42	-2.0
2,677,988	+		Synpcc7942_2595	0.43	-0.3
2,678,003	+		Synpcc7942_2595	0.44	-0.4
2,678,003	+		Synpcc7942_2595	0.44	-1.1
2,678,003	+		Synpcc7942_2595	0.44	-1.6
2,678,011	-		Synpcc7942_2595	0.44	-1.5
2,678,011	-		Synpcc7942_2595	0.44	-5.2
2,678,016	+		Synpcc7942_2595	0.45	-2.3
2,678,024	-		Synpcc7942_2595	0.45	-0.5
2,678,033	+		Synpcc7942_2595	0.46	-1.9
2,678,059	-		Synpcc7942_2595	0.48	-4.7
2,678,060	-		Synpcc7942_2595	0.48	-2.5
2,678,060	-		Synpcc7942_2595	0.48	-3.7
2,678,103	+		Synpcc7942_2595	0.51	-1.2
2,678,146	-		Synpcc7942_2595	0.54	-0.3
2,678,147	-		Synpcc7942_2595	0.54	+0.2
2,678,210	+		Synpcc7942_2595	0.58	+2.2
2,678,228	-		Synpcc7942_2595	0.59	-1.6
2,678,239	-		Synpcc7942_2595	0.60	-0.1
2,678,239	-		Synpcc7942_2595	0.60	-2.2
2,678,241	+		Synpcc7942_2595	0.60	-0.7
2,678,242	+		Synpcc7942_2595	0.60	-1.3
2,678,250	-		Synpcc7942_2595	0.61	-0.7
2,678,250	-		Synpcc7942_2595	0.61	-0.8
2,678,250	-		Synpcc7942_2595	0.61	-3.3
2,678,251	-		Synpcc7942_2595	0.61	-4.8
2,678,251	-		Synpcc7942_2595	0.61	-0.8
2,678,314	+		Synpcc7942_2595	0.65	-3.6
2,678,314	+		Synpcc7942_2595	0.65	-2.0
2,678,317	-		Synpcc7942_2595	0.66	-0.8
2,678,347	-		Synpcc7942_2595	0.68	-3.5
2,678,362	+		Synpcc7942_2595	0.69	+0.2
2,678,368	-		Synpcc7942_2595	0.69	+0.5
2,678,368	-		Synpcc7942_2595	0.69	-2.0
2,678,376	+		Synpcc7942_2595	0.70	-0.8
2,678,403	-		Synpcc7942_2595	0.72	-4.0
2,678,438	+		Synpcc7942_2595	0.74	-0.1
2,678,503	-		Synpcc7942_2595	0.79	-2.3
2,678,562	+		Synpcc7942_2595	0.83	-1.3
2,678,580	-		Synpcc7942_2595	0.84	-3.7
2,678,582	+		Synpcc7942_2595	0.84	-0.7
2,678,582	+		Synpcc7942_2595	0.84	-2.8
2,678,587	+		Synpcc7942_2595	0.84	-2.6
2,678,588	-		Synpcc7942_2595	0.85	-0.5
2,678,595	-		Synpcc7942_2595	0.85	-0.7
2,678,613	+		Synpcc7942_2595	0.86	+0.9
2,678,619	-		Synpcc7942_2595	0.87	-1.1
2,678,627	-		Synpcc7942_2595	0.87	-1.3
2,678,682	-				-1.9