Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2545

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,623,984	+		Synpcc7942_2543	0.34	-0.5
2,623,984	+		Synpcc7942_2543	0.34	-1.6
2,623,989	-		Synpcc7942_2543	0.35	-4.9
2,624,043	+		Synpcc7942_2543	0.43	+1.6
2,624,125	+		Synpcc7942_2543	0.54	-2.6
2,624,146	-		Synpcc7942_2543	0.57	+0.9
2,624,171	+		Synpcc7942_2543	0.61	-1.7
2,624,191	-		Synpcc7942_2543	0.63	-5.5
2,624,196	-		Synpcc7942_2543	0.64	-1.9
2,624,224	+		Synpcc7942_2543	0.68	-0.1
2,624,235	+		Synpcc7942_2543	0.70	-2.8
2,624,245	+		Synpcc7942_2543	0.71	-1.5
2,624,247	-		Synpcc7942_2543	0.71	+0.7
2,624,271	+		Synpcc7942_2543	0.75	+2.8
2,624,276	+		Synpcc7942_2543	0.75	+0.2
2,624,286	+		Synpcc7942_2543	0.77	-2.6
2,624,287	+		Synpcc7942_2543	0.77	+1.2
2,624,294	-		Synpcc7942_2543	0.78	-2.2
2,624,294	-		Synpcc7942_2543	0.78	-1.6
2,624,294	-		Synpcc7942_2543	0.78	-4.1
2,624,294	-		Synpcc7942_2543	0.78	-1.1
2,624,294	-		Synpcc7942_2543	0.78	-0.8
2,624,296	+		Synpcc7942_2543	0.78	+1.2
2,624,325	-		Synpcc7942_2543	0.82	+1.1
2,624,346	-		Synpcc7942_2543	0.85	-0.6
2,624,354	+		Synpcc7942_2543	0.86	-0.3
2,624,388	-				+1.7
2,624,428	+				-2.6
2,624,428	+				+1.5
2,624,428	+				-1.7
2,624,432	+				+0.3
2,624,451	+				-0.3
2,624,476	+				-3.6
2,624,484	-				-1.3
2,624,484	-				-2.0
2,624,484	-				+2.8
2,624,486	+				-2.3
2,624,494	-				-1.4
2,624,517	+				-2.3
2,624,527	-		Synpcc7942_2544	0.12	+1.8
2,624,535	-		Synpcc7942_2544	0.14	+2.9
2,624,572	+		Synpcc7942_2544	0.24	+0.2
2,624,579	+		Synpcc7942_2544	0.26	+0.5
2,624,597	+		Synpcc7942_2544	0.30	-0.6
2,624,617	+		Synpcc7942_2544	0.35	+3.6
2,624,625	-		Synpcc7942_2544	0.37	+1.5
2,624,661	+		Synpcc7942_2544	0.47	-1.1
2,624,661	+		Synpcc7942_2544	0.47	+0.4
2,624,669	+		Synpcc7942_2544	0.49	-2.2
2,624,706	+		Synpcc7942_2544	0.58	+3.2
2,624,706	+		Synpcc7942_2544	0.58	-0.1
2,624,714	-		Synpcc7942_2544	0.60	+0.6
2,624,771	+		Synpcc7942_2544	0.75	+1.2
2,624,771	+		Synpcc7942_2544	0.75	-0.1
2,624,771	+		Synpcc7942_2544	0.75	-2.4
2,624,779	-		Synpcc7942_2544	0.77	+0.7
2,624,779	-		Synpcc7942_2544	0.77	-0.1
2,624,797	+		Synpcc7942_2544	0.82	-0.2
2,624,802	+		Synpcc7942_2544	0.83	-2.1
2,624,802	-		Synpcc7942_2544	0.83	+0.3
2,624,804	+		Synpcc7942_2544	0.83	+0.2
2,624,807	+		Synpcc7942_2544	0.84	+0.9
2,624,807	+		Synpcc7942_2544	0.84	+3.0
2,624,807	+		Synpcc7942_2544	0.84	-2.6
2,624,807	-		Synpcc7942_2544	0.84	-2.0
2,624,812	-		Synpcc7942_2544	0.85	-1.3
2,624,812	-		Synpcc7942_2544	0.85	+1.4
2,624,812	-		Synpcc7942_2544	0.85	-0.9
2,624,812	-		Synpcc7942_2544	0.85	+1.0
2,624,812	-		Synpcc7942_2544	0.85	+3.3
2,624,815	-		Synpcc7942_2544	0.86	+2.9
2,624,815	-		Synpcc7942_2544	0.86	-2.3
2,624,815	-		Synpcc7942_2544	0.86	-2.4
2,624,815	-		Synpcc7942_2544	0.86	+0.0
2,624,815	-		Synpcc7942_2544	0.86	-0.5
2,624,815	-		Synpcc7942_2544	0.86	+0.3
2,624,843	+				+0.3
2,624,853	+				+0.3
2,624,853	+				+0.5
2,624,853	+				+0.7
2,624,861	-				-1.3
2,624,879	+				+0.6
2,624,920	-				-3.0
2,626,155	+				+1.8
2,626,169	-				-1.6
2,626,173	-				-2.5
2,626,173	-				+0.1
2,626,183	-				-1.2
2,626,185	+				-0.3
2,626,202	+				+1.0
2,626,207	+				-0.8
2,626,210	-				+0.8
2,626,239	+				-0.7
2,626,239	+				-0.1
2,626,241	-				-3.7
2,626,303	-				+0.4
2,626,305	-				+0.7
2,626,305	-				-0.1
2,626,312	+		Synpcc7942_2546	0.10	-1.5
2,626,318	-		Synpcc7942_2546	0.11	+0.1
2,626,341	+		Synpcc7942_2546	0.14	+1.0
2,626,341	+		Synpcc7942_2546	0.14	-2.2
2,626,371	+		Synpcc7942_2546	0.19	-0.1
2,626,375	+		Synpcc7942_2546	0.19	-2.9
2,626,384	-		Synpcc7942_2546	0.20	+1.4
2,626,384	-		Synpcc7942_2546	0.20	-1.7
2,626,386	+		Synpcc7942_2546	0.21	-0.1
2,626,389	-		Synpcc7942_2546	0.21	+0.1
2,626,391	-		Synpcc7942_2546	0.21	-1.0
2,626,415	-		Synpcc7942_2546	0.25	-0.1
2,626,420	-		Synpcc7942_2546	0.25	-1.8
2,626,448	-		Synpcc7942_2546	0.29	+1.5
2,626,494	-		Synpcc7942_2546	0.36	+0.7
2,626,505	+		Synpcc7942_2546	0.37	-1.8
2,626,505	+		Synpcc7942_2546	0.37	-1.9
2,626,513	-		Synpcc7942_2546	0.38	-1.6
2,626,587	-		Synpcc7942_2546	0.49	+2.3
2,626,679	+		Synpcc7942_2546	0.61	-0.5
2,626,687	-		Synpcc7942_2546	0.62	-0.6
2,626,725	+		Synpcc7942_2546	0.68	-0.1
2,626,733	-		Synpcc7942_2546	0.69	-3.9
2,626,754	-		Synpcc7942_2546	0.72	+0.0
2,626,754	-		Synpcc7942_2546	0.72	+2.8
2,626,754	-		Synpcc7942_2546	0.72	-1.9
2,626,761	+		Synpcc7942_2546	0.73	-2.4
2,626,761	+		Synpcc7942_2546	0.73	-4.6
2,626,769	-		Synpcc7942_2546	0.74	-0.5
2,626,769	-		Synpcc7942_2546	0.74	-1.5
2,626,770	-		Synpcc7942_2546	0.74	-0.8
2,626,772	+		Synpcc7942_2546	0.74	+0.5
2,626,780	-		Synpcc7942_2546	0.75	+0.7
2,626,794	-		Synpcc7942_2546	0.77	+2.5
2,626,808	-		Synpcc7942_2546	0.79	+0.1
2,626,863	+		Synpcc7942_2546	0.87	+0.9
2,626,863	+		Synpcc7942_2546	0.87	+1.8
2,626,864	+		Synpcc7942_2546	0.87	-1.7
2,626,864	+		Synpcc7942_2546	0.87	+1.8
2,626,864	-		Synpcc7942_2546	0.87	-2.7
2,626,869	+		Synpcc7942_2546	0.88	+0.4
2,626,869	+		Synpcc7942_2546	0.88	+1.1
2,626,872	-		Synpcc7942_2546	0.88	+0.8
2,626,879	+		Synpcc7942_2546	0.89	-1.5
2,626,879	+		Synpcc7942_2546	0.89	-2.1
2,626,879	+		Synpcc7942_2546	0.89	-0.3
2,626,880	+		Synpcc7942_2546	0.89	+1.8
2,626,888	-				+1.5
2,626,888	-				+2.5
2,626,888	-				-0.9
2,626,888	-				-0.8
2,626,888	-				+0.6
2,626,900	-				-0.1
2,626,937	-				+0.6
2,626,964	+				-1.5
2,626,964	+				+2.7
2,626,964	+				+0.2
2,626,970	-				+0.5
2,626,972	-				+0.3
2,626,993	+				-0.8
2,627,007	-				-1.9
2,627,031	+				+0.2
2,627,045	-		Synpcc7942_2547	0.12	-0.7
2,627,090	-		Synpcc7942_2547	0.26	-0.1
2,627,090	-		Synpcc7942_2547	0.26	+3.3
2,627,120	-		Synpcc7942_2547	0.36	+0.5
2,627,136	+		Synpcc7942_2547	0.41	-0.0