Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2357

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,422,007	-		Synpcc7942_2355	0.70	-2.6
2,422,012	+		Synpcc7942_2355	0.72	-1.9
2,422,014	+		Synpcc7942_2355	0.73	-1.7
2,422,022	-		Synpcc7942_2355	0.75	-3.4
2,422,022	-		Synpcc7942_2355	0.75	-3.0
2,422,031	+		Synpcc7942_2355	0.78	-2.6
2,422,050	+		Synpcc7942_2355	0.84	-3.4
2,422,075	-				-1.6
2,422,099	+				+0.4
2,422,113	-				-2.2
2,422,115	+				-3.0
2,422,127	+				-1.6
2,422,142	+				-3.3
2,422,152	+				-2.8
2,422,152	+				-5.5
2,422,152	+				-0.9
2,422,152	+				-1.8
2,422,152	+				-0.7
2,422,152	+				-4.1
2,422,152	+				-0.1
2,422,160	-				-2.1
2,422,160	-				-0.3
2,422,160	-				-3.7
2,422,160	-				-2.1
2,422,160	-				-0.3
2,422,160	-				-0.1
2,422,160	-				-1.9
2,422,160	-				-1.0
2,422,170	-				-3.7
2,422,170	-				-2.9
2,422,170	-				-0.6
2,422,171	+				-2.3
2,422,185	-				-0.1
2,422,185	-				-1.2
2,422,185	-				+0.3
2,422,191	+				-0.1
2,422,196	-				-1.9
2,422,203	+				-2.6
2,422,213	-				-0.6
2,422,215	+				-2.6
2,422,223	-				+0.5
2,422,282	-		Synpcc7942_2356	0.14	+0.9
2,422,315	+		Synpcc7942_2356	0.19	+1.5
2,422,320	-		Synpcc7942_2356	0.20	-2.3
2,422,321	-		Synpcc7942_2356	0.20	-1.8
2,422,321	-		Synpcc7942_2356	0.20	-0.7
2,422,327	+		Synpcc7942_2356	0.21	+1.3
2,422,342	-		Synpcc7942_2356	0.24	-1.2
2,422,342	-		Synpcc7942_2356	0.24	-1.8
2,422,348	-		Synpcc7942_2356	0.25	+1.4
2,422,406	+		Synpcc7942_2356	0.34	+0.2
2,422,426	-		Synpcc7942_2356	0.37	+0.3
2,422,426	-		Synpcc7942_2356	0.37	-1.3
2,422,530	-		Synpcc7942_2356	0.54	-1.8
2,422,561	-		Synpcc7942_2356	0.59	-0.7
2,422,575	+		Synpcc7942_2356	0.61	+0.6
2,422,575	+		Synpcc7942_2356	0.61	-0.2
2,422,575	+		Synpcc7942_2356	0.61	-2.6
2,422,575	+		Synpcc7942_2356	0.61	-2.2
2,422,580	+		Synpcc7942_2356	0.62	+2.6
2,422,583	-		Synpcc7942_2356	0.62	-2.3
2,422,583	-		Synpcc7942_2356	0.62	+0.5
2,422,585	+		Synpcc7942_2356	0.63	-2.1
2,422,588	-		Synpcc7942_2356	0.63	-1.1
2,422,588	-		Synpcc7942_2356	0.63	+0.7
2,422,641	+		Synpcc7942_2356	0.71	-1.7
2,422,658	+		Synpcc7942_2356	0.74	+0.2
2,422,658	+		Synpcc7942_2356	0.74	-0.9
2,422,663	+		Synpcc7942_2356	0.75	-2.6
2,422,663	+		Synpcc7942_2356	0.75	-0.8
2,422,671	-		Synpcc7942_2356	0.76	-0.1
2,422,671	-		Synpcc7942_2356	0.76	-0.8
2,422,713	-		Synpcc7942_2356	0.83	+2.4
2,422,730	-		Synpcc7942_2356	0.86	-1.7
2,422,733	-		Synpcc7942_2356	0.86	-0.1
2,422,738	-				+0.5
2,422,775	+				-3.3
2,422,787	+				+0.1
2,422,788	-				-0.2
2,422,792	+				-1.0
2,422,794	-				-0.1
2,422,795	-				+2.1
2,422,816	-				-1.1
2,422,856	+				-3.1
2,422,905	+				+0.9
2,422,919	-				-0.5
2,422,946	+				-0.2
2,422,946	+				-3.0
2,423,051	-				-1.1
2,423,107	+				-3.5
2,423,107	+				-1.6
2,423,115	-				-2.0
2,423,125	-				-6.4
2,423,182	+		Synpcc7942_2357	0.13	-0.9
2,423,229	+		Synpcc7942_2357	0.16	-1.4
2,423,229	+		Synpcc7942_2357	0.16	-2.6
2,423,229	+		Synpcc7942_2357	0.16	-0.5
2,423,229	+		Synpcc7942_2357	0.16	-2.4
2,423,237	-		Synpcc7942_2357	0.16	-1.9
2,423,237	-		Synpcc7942_2357	0.16	-3.2
2,423,242	+		Synpcc7942_2357	0.17	-1.5
2,423,249	+		Synpcc7942_2357	0.17	-2.0
2,423,250	-		Synpcc7942_2357	0.17	-1.4
2,423,257	-		Synpcc7942_2357	0.18	-2.8
2,423,257	-		Synpcc7942_2357	0.18	-1.0
2,423,257	-		Synpcc7942_2357	0.18	-2.0
2,423,257	-		Synpcc7942_2357	0.18	-1.4
2,423,259	-		Synpcc7942_2357	0.18	-1.8
2,423,313	+		Synpcc7942_2357	0.22	-2.7
2,423,314	+		Synpcc7942_2357	0.22	-2.6
2,423,321	-		Synpcc7942_2357	0.22	-2.9
2,423,322	-		Synpcc7942_2357	0.22	-2.4
2,423,322	-		Synpcc7942_2357	0.22	-3.5
2,423,327	+		Synpcc7942_2357	0.23	-2.2
2,423,327	+		Synpcc7942_2357	0.23	-3.0
2,423,327	+		Synpcc7942_2357	0.23	-0.7
2,423,378	-		Synpcc7942_2357	0.26	-1.3
2,423,389	+		Synpcc7942_2357	0.27	-0.8
2,423,389	+		Synpcc7942_2357	0.27	-1.6
2,423,397	-		Synpcc7942_2357	0.27	-2.6
2,423,413	+		Synpcc7942_2357	0.28	-1.7
2,423,442	-		Synpcc7942_2357	0.30	-5.2
2,423,446	+		Synpcc7942_2357	0.31	-1.6
2,423,452	+		Synpcc7942_2357	0.31	-0.5
2,423,457	+		Synpcc7942_2357	0.32	-0.3
2,423,460	-		Synpcc7942_2357	0.32	-1.0
2,423,460	-		Synpcc7942_2357	0.32	-1.2
2,423,465	-		Synpcc7942_2357	0.32	-2.5
2,423,474	+		Synpcc7942_2357	0.33	-0.7
2,423,482	-				+0.9
2,423,482	-		Synpcc7942_2357	0.33	-1.5
2,423,482	-		Synpcc7942_2357	0.33	-1.1
2,423,482	-		Synpcc7942_2357	0.33	-0.8
2,423,482	-				-1.1
2,423,485	+		Synpcc7942_2357	0.33	-0.3
2,423,503	+		Synpcc7942_2357	0.35	+0.5
2,423,503	+		Synpcc7942_2357	0.35	-2.3
2,423,508	+		Synpcc7942_2357	0.35	-1.8
2,423,511	-		Synpcc7942_2357	0.35	+1.2
2,423,511	-		Synpcc7942_2357	0.35	+0.5
2,423,531	+		Synpcc7942_2357	0.37	-1.7
2,423,531	+		Synpcc7942_2357	0.37	-3.0
2,423,531	+		Synpcc7942_2357	0.37	-4.8
2,423,531	+		Synpcc7942_2357	0.37	-2.5
2,423,539	-		Synpcc7942_2357	0.37	-3.3
2,423,539	-		Synpcc7942_2357	0.37	-3.2
2,423,544	-		Synpcc7942_2357	0.38	-1.9
2,423,544	-		Synpcc7942_2357	0.38	+1.5
2,423,544	-		Synpcc7942_2357	0.38	-3.6
2,423,574	+		Synpcc7942_2357	0.40	-1.2
2,423,576	-		Synpcc7942_2357	0.40	-1.4
2,423,582	-		Synpcc7942_2357	0.40	-3.3
2,423,582	-		Synpcc7942_2357	0.40	-0.4
2,423,590	+		Synpcc7942_2357	0.41	-3.3
2,423,605	+		Synpcc7942_2357	0.42	-2.9
2,423,613	-		Synpcc7942_2357	0.42	-0.7
2,423,613	-		Synpcc7942_2357	0.42	-1.3
2,423,626	+		Synpcc7942_2357	0.43	-1.8
2,423,686	-		Synpcc7942_2357	0.47	-0.3
2,423,689	-		Synpcc7942_2357	0.48	-0.5
2,423,700	+		Synpcc7942_2357	0.48	-2.5
2,423,711	-		Synpcc7942_2357	0.49	-3.4
2,423,727	+		Synpcc7942_2357	0.50	-2.2
2,423,735	-		Synpcc7942_2357	0.51	-3.7
2,423,755	-		Synpcc7942_2357	0.52	-0.5
2,423,757	+		Synpcc7942_2357	0.52	-2.6
2,423,757	-		Synpcc7942_2357	0.52	-0.7
2,423,773	+				-0.1
2,423,773	+		Synpcc7942_2357	0.53	-2.0
2,423,773	+		Synpcc7942_2357	0.53	-2.6
2,423,781	-		Synpcc7942_2357	0.54	-1.6
2,423,781	-		Synpcc7942_2357	0.54	-3.7
2,423,782	-		Synpcc7942_2357	0.54	-2.6
2,423,788	+		Synpcc7942_2357	0.54	-1.2
2,423,796	-		Synpcc7942_2357	0.55	-1.7
2,423,803	-		Synpcc7942_2357	0.55	-0.3
2,423,811	-		Synpcc7942_2357	0.56	-5.5
2,423,816	+		Synpcc7942_2357	0.56	-1.9
2,423,854	-		Synpcc7942_2357	0.59	-2.9
2,423,876	+		Synpcc7942_2357	0.61	-3.3
2,423,884	+		Synpcc7942_2357	0.61	-3.7
2,423,913	+		Synpcc7942_2357	0.63	-2.5
2,423,913	+		Synpcc7942_2357	0.63	+1.3
2,423,917	-		Synpcc7942_2357	0.63	-2.0
2,423,918	+		Synpcc7942_2357	0.63	-0.7
2,423,936	-		Synpcc7942_2357	0.65	-1.1
2,424,018	+		Synpcc7942_2357	0.70	-1.3
2,424,026	-		Synpcc7942_2357	0.71	-2.3
2,424,038	-		Synpcc7942_2357	0.72	-4.5
2,424,084	-		Synpcc7942_2357	0.75	-2.6
2,424,118	-		Synpcc7942_2357	0.77	-3.1
2,424,118	-		Synpcc7942_2357	0.77	-2.1
2,424,131	+		Synpcc7942_2357	0.78	-3.6
2,424,136	+		Synpcc7942_2357	0.78	+0.3
2,424,138	+		Synpcc7942_2357	0.79	-2.3
2,424,138	+		Synpcc7942_2357	0.79	-1.0
2,424,138	+		Synpcc7942_2357	0.79	-2.3
2,424,138	+		Synpcc7942_2357	0.79	-0.3
2,424,139	-				-0.3
2,424,141	+		Synpcc7942_2357	0.79	-3.9
2,424,146	-		Synpcc7942_2357	0.79	-1.6
2,424,148	-		Synpcc7942_2357	0.79	-1.3
2,424,149	-		Synpcc7942_2357	0.79	-2.3
2,424,158	-		Synpcc7942_2357	0.80	-1.9
2,424,177	+		Synpcc7942_2357	0.81	-0.5
2,424,221	+		Synpcc7942_2357	0.84	+0.2
2,424,264	-		Synpcc7942_2357	0.87	-3.5
2,424,292	+		Synpcc7942_2357	0.89	-0.2
2,424,300	-		Synpcc7942_2357	0.90	-1.6
2,424,315	+				-1.0
2,424,315	+				-1.5
2,424,323	-				-0.8
2,424,323	-				-4.6
2,424,332	-				+0.2
2,424,333	-				-2.6
2,424,333	-				-0.8
2,424,356	+				-2.5
2,424,356	+				-1.0
2,424,371	-				-1.7
2,424,374	-				-2.3
2,424,406	-				-1.4
2,424,424	+				-1.1
2,424,424	+				-1.3
2,424,430	+				-0.9
2,424,438	-				-1.6
2,424,438	-				-2.9
2,424,444	-				-0.8
2,424,444	-				-2.8
2,424,473	-				-2.6
2,424,482	+				+0.3
2,424,483	-				-3.9
2,424,483	-				-1.9
2,424,527	-				-1.0
2,424,535	-				-4.2
2,424,544	-				-2.9
2,424,549	-				-2.9
2,424,557	-				-0.7
2,424,615	-				-0.7
2,424,625	+		Synpcc7942_2358	0.12	-1.8
2,424,625	+		Synpcc7942_2358	0.12	-2.2
2,424,633	-		Synpcc7942_2358	0.13	-1.6
2,424,694	+		Synpcc7942_2358	0.21	-3.3
2,424,722	-		Synpcc7942_2358	0.24	-2.7
2,424,769	-		Synpcc7942_2358	0.30	-3.3
2,424,813	-		Synpcc7942_2358	0.35	-5.0
2,424,841	+		Synpcc7942_2358	0.38	-3.5
2,424,841	+		Synpcc7942_2358	0.38	-0.1
2,424,841	+		Synpcc7942_2358	0.38	-1.3
2,424,841	+		Synpcc7942_2358	0.38	-0.7
2,424,841	+		Synpcc7942_2358	0.38	-3.4
2,424,842	-		Synpcc7942_2358	0.39	+0.8
2,424,842	-		Synpcc7942_2358	0.39	-3.0
2,424,849	-		Synpcc7942_2358	0.39	-1.4
2,424,849	-		Synpcc7942_2358	0.39	-2.7
2,424,849	-		Synpcc7942_2358	0.39	-5.3
2,424,859	-		Synpcc7942_2358	0.41	-4.2
2,424,859	-		Synpcc7942_2358	0.41	-4.9
2,424,862	-		Synpcc7942_2358	0.41	-2.2
2,424,869	-		Synpcc7942_2358	0.42	-4.1
2,424,888	+		Synpcc7942_2358	0.44	-4.5
2,424,910	+		Synpcc7942_2358	0.47	-4.6
2,424,935	+		Synpcc7942_2358	0.50	-2.5
2,424,935	-		Synpcc7942_2358	0.50	-0.7
2,424,953	-		Synpcc7942_2358	0.52	-3.3
2,425,071	+		Synpcc7942_2358	0.66	-0.1
2,425,071	+		Synpcc7942_2358	0.66	-5.1
2,425,079	-				+0.5
2,425,094	-		Synpcc7942_2358	0.69	+0.1
2,425,098	+		Synpcc7942_2358	0.69	-2.2
2,425,106	-		Synpcc7942_2358	0.70	+0.1
2,425,112	-		Synpcc7942_2358	0.71	-2.1
2,425,131	+		Synpcc7942_2358	0.73	-1.5
2,425,131	+		Synpcc7942_2358	0.73	-3.2
2,425,131	+		Synpcc7942_2358	0.73	-1.4
2,425,148	+		Synpcc7942_2358	0.75	-4.2
2,425,190	-		Synpcc7942_2358	0.80	+0.2
2,425,201	-		Synpcc7942_2358	0.82	+1.5
2,425,221	+		Synpcc7942_2358	0.84	-3.3
2,425,229	-		Synpcc7942_2358	0.85	+0.5
2,425,232	+		Synpcc7942_2358	0.85	-1.4
2,425,234	-		Synpcc7942_2358	0.86	+4.3
2,425,243	+		Synpcc7942_2358	0.87	-2.5
2,425,299	+				-1.4
2,425,307	-				-1.8
2,425,309	+				-0.3
2,425,311	+				-2.2
2,425,311	+				-3.7
2,425,317	-				+0.9
2,425,317	-				+0.9
2,425,317	-				-3.1
2,425,317	-				+0.2
2,425,317	-				-3.9
2,425,317	-				-0.2
2,425,319	-				+1.5
2,425,319	-				-2.3
2,425,319	-				-1.1
2,425,319	-				-2.0
2,425,319	-				-2.3
2,425,366	-				-1.1
2,425,384	-				-0.5
2,425,384	-				-2.2
2,425,384	-				-3.3
2,425,385	-				+0.8