Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2066

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,141,959	+		Synpcc7942_2065	0.12	+0.7
2,142,041	-		Synpcc7942_2065	0.44	-1.5
2,142,200	+				-1.0
2,142,239	-				+0.3
2,142,255	-				-1.4
2,142,255	-				-0.2
2,142,294	+				+0.0
2,142,300	-				-2.4
2,142,302	-				-2.2
2,142,368	-				-2.1
2,142,376	+				-1.3
2,142,376	+				-1.1
2,142,376	+				-2.3
2,142,384	-		Synpcc7942_2066	0.10	-1.4
2,142,412	+		Synpcc7942_2066	0.13	-2.5
2,142,429	-		Synpcc7942_2066	0.15	-1.1
2,142,430	-		Synpcc7942_2066	0.15	-1.1
2,142,460	+		Synpcc7942_2066	0.18	-1.3
2,142,466	-		Synpcc7942_2066	0.18	-2.3
2,142,476	+		Synpcc7942_2066	0.19	-1.2
2,142,484	-		Synpcc7942_2066	0.20	-3.5
2,142,524	+		Synpcc7942_2066	0.24	-3.6
2,142,530	+		Synpcc7942_2066	0.24	-2.2
2,142,532	-		Synpcc7942_2066	0.25	-0.5
2,142,538	+		Synpcc7942_2066	0.25	-2.1
2,142,538	+		Synpcc7942_2066	0.25	-1.5
2,142,538	+		Synpcc7942_2066	0.25	-2.3
2,142,607	+		Synpcc7942_2066	0.32	-0.2
2,142,625	-		Synpcc7942_2066	0.34	-1.3
2,142,634	+		Synpcc7942_2066	0.34	-2.7
2,142,642	-		Synpcc7942_2066	0.35	-1.2
2,142,750	+		Synpcc7942_2066	0.46	-1.9
2,142,770	-		Synpcc7942_2066	0.48	-2.1
2,142,785	-		Synpcc7942_2066	0.49	-3.5
2,142,794	+				+0.5
2,142,809	+		Synpcc7942_2066	0.51	-1.6
2,142,836	-		Synpcc7942_2066	0.54	-2.8
2,142,836	-		Synpcc7942_2066	0.54	-2.7
2,142,836	-		Synpcc7942_2066	0.54	-0.9
2,142,883	+		Synpcc7942_2066	0.59	-1.2
2,142,914	+		Synpcc7942_2066	0.62	-4.3
2,142,914	+		Synpcc7942_2066	0.62	-1.2
2,142,914	+		Synpcc7942_2066	0.62	-2.1
2,142,914	+		Synpcc7942_2066	0.62	-2.4
2,142,922	-		Synpcc7942_2066	0.62	-2.6
2,142,922	-		Synpcc7942_2066	0.62	-0.1
2,142,922	-		Synpcc7942_2066	0.62	-2.8
2,142,922	-		Synpcc7942_2066	0.62	-3.8
2,142,922	-		Synpcc7942_2066	0.62	-2.1
2,142,922	-				-0.7
2,142,922	-		Synpcc7942_2066	0.62	-1.9
2,142,922	-		Synpcc7942_2066	0.62	-0.8
2,142,922	-		Synpcc7942_2066	0.62	-3.1
2,142,922	-		Synpcc7942_2066	0.62	-1.1
2,142,922	-		Synpcc7942_2066	0.62	-4.2
2,142,922	-		Synpcc7942_2066	0.62	-1.3
2,142,922	-		Synpcc7942_2066	0.62	-0.9
2,142,924	-		Synpcc7942_2066	0.62	+0.1
2,142,934	-		Synpcc7942_2066	0.63	-1.0
2,142,935	+		Synpcc7942_2066	0.64	-0.9
2,142,948	+		Synpcc7942_2066	0.65	-0.1
2,142,958	+		Synpcc7942_2066	0.66	-0.1
2,143,029	+		Synpcc7942_2066	0.73	-0.9
2,143,031	-		Synpcc7942_2066	0.73	-2.2
2,143,059	+		Synpcc7942_2066	0.76	-2.2
2,143,060	-		Synpcc7942_2066	0.76	-0.5
2,143,067	-		Synpcc7942_2066	0.76	-2.6
2,143,068	-		Synpcc7942_2066	0.76	-3.9
2,143,106	-		Synpcc7942_2066	0.80	-0.2
2,143,109	-		Synpcc7942_2066	0.80	-2.8
2,143,163	-		Synpcc7942_2066	0.86	-0.3
2,143,171	+		Synpcc7942_2066	0.86	-0.7
2,143,184	-		Synpcc7942_2066	0.88	-2.8
2,143,184	-		Synpcc7942_2066	0.88	-2.3
2,143,256	+				-1.0
2,143,264	+				-3.1
2,143,264	-				-3.5
2,143,277	-				+1.2
2,143,277	-				-0.3
2,143,277	-				-3.6
2,143,277	-				-1.6
2,143,277	-				-4.6
2,143,277	-				-0.5
2,143,279	-				-3.8
2,143,292	+				+1.9
2,143,301	+				-2.9
2,143,301	+				-1.1
2,143,322	+				+0.1
2,143,325	+				+0.4
2,143,326	+				-0.1
2,143,331	-				+0.4
2,143,333	-				-0.3
2,143,343	-				+1.3
2,143,347	+				+0.9
2,143,404	+				+2.1
2,143,404	+				-0.3
2,143,412	-				+0.8
2,143,414	-				+2.7
2,143,429	+				+4.7
2,143,429	+				+0.3
2,143,437	-				+2.3
2,143,438	+				-0.4
2,143,446	-				-1.5
2,143,457	-				-2.6
2,143,500	-		Synpcc7942_2067	0.13	+2.3
2,143,507	+		Synpcc7942_2067	0.14	-0.3
2,143,507	+		Synpcc7942_2067	0.14	+3.3
2,143,515	-		Synpcc7942_2067	0.14	-1.8
2,143,515	-		Synpcc7942_2067	0.14	-1.6
2,143,526	-		Synpcc7942_2067	0.15	+0.9
2,143,539	-		Synpcc7942_2067	0.16	-1.1
2,143,562	+		Synpcc7942_2067	0.18	+1.4
2,143,581	+		Synpcc7942_2067	0.20	+0.2
2,143,609	+		Synpcc7942_2067	0.22	+2.7
2,143,631	-		Synpcc7942_2067	0.24	+0.7
2,143,706	-		Synpcc7942_2067	0.30	+0.9
2,143,730	-		Synpcc7942_2067	0.31	-0.9
2,143,745	-		Synpcc7942_2067	0.33	+2.8
2,143,776	+		Synpcc7942_2067	0.35	+0.5
2,143,776	+		Synpcc7942_2067	0.35	+1.9
2,143,811	+		Synpcc7942_2067	0.38	-0.7
2,143,875	+		Synpcc7942_2067	0.43	+1.1
2,143,875	+		Synpcc7942_2067	0.43	+2.8
2,143,883	-		Synpcc7942_2067	0.44	-1.3
2,143,883	-		Synpcc7942_2067	0.44	-0.7
2,143,911	+		Synpcc7942_2067	0.46	-3.0
2,143,911	+		Synpcc7942_2067	0.46	-2.7
2,143,911	+		Synpcc7942_2067	0.46	+3.4
2,143,911	+		Synpcc7942_2067	0.46	-0.6
2,143,914	-		Synpcc7942_2067	0.46	-1.8
2,143,919	-		Synpcc7942_2067	0.47	-1.8
2,143,924	+		Synpcc7942_2067	0.47	-2.9
2,143,953	-		Synpcc7942_2067	0.49	+2.1
2,143,953	-		Synpcc7942_2067	0.49	-0.3
2,143,966	+		Synpcc7942_2067	0.50	+1.4
2,143,979	-		Synpcc7942_2067	0.51	-0.3
2,143,987	-		Synpcc7942_2067	0.52	+1.5
2,144,002	+		Synpcc7942_2067	0.53	-0.4
2,144,018	+		Synpcc7942_2067	0.55	+1.9
2,144,046	+		Synpcc7942_2067	0.57	-2.2
2,144,054	+		Synpcc7942_2067	0.57	+0.7
2,144,054	-		Synpcc7942_2067	0.57	-1.9
2,144,054	-		Synpcc7942_2067	0.57	-1.7
2,144,054	-		Synpcc7942_2067	0.57	-2.0
2,144,054	-		Synpcc7942_2067	0.57	-1.7
2,144,076	+		Synpcc7942_2067	0.59	-2.8
2,144,076	+		Synpcc7942_2067	0.59	-1.6
2,144,084	-		Synpcc7942_2067	0.60	-1.6
2,144,101	+		Synpcc7942_2067	0.61	+1.0
2,144,101	+		Synpcc7942_2067	0.61	-1.8
2,144,106	+		Synpcc7942_2067	0.62	+1.9
2,144,106	+				+2.5
2,144,132	+		Synpcc7942_2067	0.64	-0.1
2,144,164	+		Synpcc7942_2067	0.66	-0.1
2,144,171	+		Synpcc7942_2067	0.67	-3.2
2,144,172	-		Synpcc7942_2067	0.67	+1.1
2,144,208	-		Synpcc7942_2067	0.70	-1.0
2,144,223	+		Synpcc7942_2067	0.71	+0.4
2,144,244	-		Synpcc7942_2067	0.73	+0.2
2,144,257	-		Synpcc7942_2067	0.74	+1.9
2,144,260	+		Synpcc7942_2067	0.74	-1.4