Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS11805

Experiment: R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
2,614,446	+				-2.0
2,614,461	+				+0.0
2,614,461	+				+1.2
2,614,462	-				-1.6
2,614,462	-				-1.8
2,614,462	-				-3.0
2,614,532	+				+0.8
2,614,532	+				+0.0
2,614,532	+				-0.0
2,614,532	+				+0.4
2,614,532	+				-3.3
2,614,532	+				-0.5
2,614,532	+				-0.6
2,614,532	+				+0.8
2,614,532	+				+0.6
2,614,532	+				+0.6
2,614,532	+				+0.2
2,614,532	+				-0.5
2,614,532	+				+0.4
2,614,533	-				+1.1
2,614,533	-				+0.3
2,614,533	-				-1.0
2,614,533	-				+0.1
2,614,533	-				+1.2
2,614,533	-				+0.4
2,614,533	-				-0.8
2,614,533	-				-0.5
2,614,533	-				+0.5
2,614,533	-				-1.0
2,614,533	-				-0.3
2,614,533	-				+0.4
2,614,533	-				-1.0
2,614,533	-				-1.9
2,614,533	-				-1.8
2,614,617	+		LRK54_RS11800	0.13	-0.1
2,614,617	+		LRK54_RS11800	0.13	-0.6
2,614,650	+		LRK54_RS11800	0.22	+0.3
2,614,650	+		LRK54_RS11800	0.22	-0.1
2,614,650	+		LRK54_RS11800	0.22	-0.7
2,614,650	+		LRK54_RS11800	0.22	+0.3
2,614,650	+		LRK54_RS11800	0.22	-0.1
2,614,650	+		LRK54_RS11800	0.22	-0.1
2,614,650	+		LRK54_RS11800	0.22	-1.2
2,614,650	+		LRK54_RS11800	0.22	-0.1
2,614,650	+		LRK54_RS11800	0.22	-1.2
2,614,650	+		LRK54_RS11800	0.22	-0.5
2,614,650	+		LRK54_RS11800	0.22	-0.7
2,614,650	+		LRK54_RS11800	0.22	+0.2
2,614,650	+		LRK54_RS11800	0.22	-0.5
2,614,650	+		LRK54_RS11800	0.22	-0.0
2,614,651	-		LRK54_RS11800	0.22	-1.8
2,614,651	-		LRK54_RS11800	0.22	-1.8
2,614,651	-		LRK54_RS11800	0.22	-3.0
2,614,651	-		LRK54_RS11800	0.22	+1.7
2,614,651	-		LRK54_RS11800	0.22	-1.2
2,614,651	-		LRK54_RS11800	0.22	+0.2
2,614,651	-		LRK54_RS11800	0.22	-1.1
2,614,651	-		LRK54_RS11800	0.22	-1.2
2,614,651	-		LRK54_RS11800	0.22	-0.1
2,614,651	-		LRK54_RS11800	0.22	-0.9
2,614,651	-		LRK54_RS11800	0.22	+0.6
2,614,651	-		LRK54_RS11800	0.22	+0.6
2,614,796	+		LRK54_RS11800	0.60	-0.1
2,614,796	+		LRK54_RS11800	0.60	+2.8
2,614,796	+		LRK54_RS11800	0.60	-1.9
2,614,796	+		LRK54_RS11800	0.60	-0.5
2,614,796	+		LRK54_RS11800	0.60	+1.8
2,614,796	+		LRK54_RS11800	0.60	+2.0
2,614,797	-		LRK54_RS11800	0.60	+0.4
2,614,797	-		LRK54_RS11800	0.60	-0.8
2,614,797	-		LRK54_RS11800	0.60	-1.8
2,614,797	-		LRK54_RS11800	0.60	-1.5
2,614,797	-		LRK54_RS11800	0.60	-1.5
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	-1.2
2,614,800	+		LRK54_RS11800	0.61	-0.4
2,614,800	+		LRK54_RS11800	0.61	-0.3
2,614,800	+		LRK54_RS11800	0.61	-1.4
2,614,800	+		LRK54_RS11800	0.61	-1.6
2,614,800	+		LRK54_RS11800	0.61	-0.0
2,614,800	+		LRK54_RS11800	0.61	+0.0
2,614,800	+		LRK54_RS11800	0.61	-1.2
2,614,800	+		LRK54_RS11800	0.61	-0.6
2,614,800	+		LRK54_RS11800	0.61	+1.6
2,614,800	+		LRK54_RS11800	0.61	+1.0
2,614,800	+		LRK54_RS11800	0.61	-2.0
2,614,800	+		LRK54_RS11800	0.61	+0.4
2,614,800	+		LRK54_RS11800	0.61	-1.6
2,614,800	+		LRK54_RS11800	0.61	+0.6
2,614,800	+		LRK54_RS11800	0.61	+0.9
2,614,800	+		LRK54_RS11800	0.61	+0.2
2,614,800	+		LRK54_RS11800	0.61	-1.5
2,614,800	+		LRK54_RS11800	0.61	+0.8
2,614,800	+		LRK54_RS11800	0.61	-1.0
2,614,800	+		LRK54_RS11800	0.61	+0.4
2,614,800	+		LRK54_RS11800	0.61	-2.5
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	-0.7
2,614,800	+		LRK54_RS11800	0.61	-0.9
2,614,800	+		LRK54_RS11800	0.61	+0.5
2,614,800	+		LRK54_RS11800	0.61	-0.4
2,614,800	+		LRK54_RS11800	0.61	+0.8
2,614,800	+		LRK54_RS11800	0.61	-0.4
2,614,800	+		LRK54_RS11800	0.61	+0.3
2,614,800	+		LRK54_RS11800	0.61	-0.1
2,614,800	+		LRK54_RS11800	0.61	+0.2
2,614,800	+		LRK54_RS11800	0.61	-0.0
2,614,800	+		LRK54_RS11800	0.61	-0.6
2,614,800	+		LRK54_RS11800	0.61	-0.5
2,614,800	+		LRK54_RS11800	0.61	+0.6
2,614,800	+		LRK54_RS11800	0.61	+0.9
2,614,800	+		LRK54_RS11800	0.61	+0.5
2,614,800	+		LRK54_RS11800	0.61	-1.2
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	+0.9
2,614,800	+		LRK54_RS11800	0.61	-1.2
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	-1.9
2,614,800	+		LRK54_RS11800	0.61	+1.0
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	+0.6
2,614,800	+		LRK54_RS11800	0.61	-0.1
2,614,800	+		LRK54_RS11800	0.61	-0.5
2,614,800	+		LRK54_RS11800	0.61	+0.1
2,614,800	+		LRK54_RS11800	0.61	-1.5
2,614,800	+		LRK54_RS11800	0.61	-2.1
2,614,800	+		LRK54_RS11800	0.61	+1.6
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	-1.2
2,614,800	+		LRK54_RS11800	0.61	-0.2
2,614,800	+		LRK54_RS11800	0.61	-0.5
2,614,800	+		LRK54_RS11800	0.61	-0.8
2,614,800	+		LRK54_RS11800	0.61	-1.8
2,614,800	+		LRK54_RS11800	0.61	+0.4
2,614,800	+		LRK54_RS11800	0.61	+1.6
2,614,800	+		LRK54_RS11800	0.61	+1.0
2,614,800	+		LRK54_RS11800	0.61	+0.1
2,614,800	+		LRK54_RS11800	0.61	-1.7
2,614,800	+		LRK54_RS11800	0.61	+0.0
2,614,800	+		LRK54_RS11800	0.61	-1.6
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	-1.5
2,614,801	-		LRK54_RS11800	0.61	-1.1
2,614,801	-		LRK54_RS11800	0.61	-0.5
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	-0.3
2,614,801	-		LRK54_RS11800	0.61	+0.5
2,614,801	-		LRK54_RS11800	0.61	+0.8
2,614,801	-		LRK54_RS11800	0.61	-1.7
2,614,801	-		LRK54_RS11800	0.61	-1.6
2,614,801	-		LRK54_RS11800	0.61	-0.4
2,614,801	-		LRK54_RS11800	0.61	-1.2
2,614,801	-		LRK54_RS11800	0.61	-1.9
2,614,801	-		LRK54_RS11800	0.61	+1.0
2,614,801	-		LRK54_RS11800	0.61	+0.6
2,614,801	-		LRK54_RS11800	0.61	-0.2
2,614,801	-		LRK54_RS11800	0.61	+2.2
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	+1.2
2,614,801	-		LRK54_RS11800	0.61	-1.7
2,614,801	-		LRK54_RS11800	0.61	+0.0
2,614,801	-		LRK54_RS11800	0.61	-0.7
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	+0.2
2,614,801	-		LRK54_RS11800	0.61	-0.6
2,614,801	-		LRK54_RS11800	0.61	-0.7
2,614,801	-		LRK54_RS11800	0.61	+0.8
2,614,801	-		LRK54_RS11800	0.61	-0.4
2,614,801	-		LRK54_RS11800	0.61	-0.2
2,614,801	-		LRK54_RS11800	0.61	+0.5
2,614,801	-		LRK54_RS11800	0.61	-0.0
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	-0.5
2,614,801	-		LRK54_RS11800	0.61	-2.3
2,614,801	-		LRK54_RS11800	0.61	-2.0
2,614,801	-		LRK54_RS11800	0.61	+0.3
2,614,801	-		LRK54_RS11800	0.61	-0.1
2,614,801	-		LRK54_RS11800	0.61	+0.3
2,614,801	-		LRK54_RS11800	0.61	+0.2
2,614,801	-		LRK54_RS11800	0.61	-0.8
2,614,801	-		LRK54_RS11800	0.61	-2.0
2,614,801	-		LRK54_RS11800	0.61	-0.4
2,614,801	-		LRK54_RS11800	0.61	+1.6
2,614,801	-		LRK54_RS11800	0.61	-1.5
2,614,851	+		LRK54_RS11800	0.74	+0.0
2,614,851	+		LRK54_RS11800	0.74	+0.6
2,614,851	+		LRK54_RS11800	0.74	-1.0
2,614,851	+		LRK54_RS11800	0.74	+1.0
2,614,852	-		LRK54_RS11800	0.74	-1.0
2,614,852	-		LRK54_RS11800	0.74	-0.2
2,614,852	-		LRK54_RS11800	0.74	-1.4
2,614,852	-		LRK54_RS11800	0.74	-1.1
2,614,852	-		LRK54_RS11800	0.74	+1.1
2,614,995	+				-0.6
2,614,995	+				+0.4
2,614,995	+				-1.1
2,614,995	+				+3.2
2,614,995	+				-1.2
2,614,995	+				-1.0
2,614,996	-				-0.1
2,614,996	-				+0.3
2,614,996	-				+0.2
2,614,996	-				-2.2
2,614,996	-				+1.0
2,614,996	-				-1.8
2,615,192	-				-1.4
2,615,192	-				-2.5
2,615,192	-				-1.4
2,615,410	+		LRK54_RS11805	0.18	-1.9
2,615,410	+		LRK54_RS11805	0.18	-0.2
2,615,410	+		LRK54_RS11805	0.18	+0.0
2,615,411	-		LRK54_RS11805	0.18	-1.2
2,615,420	+		LRK54_RS11805	0.18	-1.1
2,615,420	+		LRK54_RS11805	0.18	+0.6
2,615,420	+		LRK54_RS11805	0.18	-0.1
2,615,420	+		LRK54_RS11805	0.18	-3.0
2,615,420	+		LRK54_RS11805	0.18	-2.0
2,615,420	+		LRK54_RS11805	0.18	-1.7
2,615,420	+		LRK54_RS11805	0.18	-0.6
2,615,420	+		LRK54_RS11805	0.18	-1.4
2,615,420	+		LRK54_RS11805	0.18	-2.1
2,615,420	+		LRK54_RS11805	0.18	-1.4
2,615,421	-		LRK54_RS11805	0.18	-1.6
2,615,421	-		LRK54_RS11805	0.18	-1.1
2,615,421	-		LRK54_RS11805	0.18	+0.1
2,615,421	-		LRK54_RS11805	0.18	-0.2
2,615,421	-		LRK54_RS11805	0.18	-2.5
2,615,421	-		LRK54_RS11805	0.18	-0.4
2,615,421	-		LRK54_RS11805	0.18	-1.2
2,615,421	-		LRK54_RS11805	0.18	-1.0
2,615,421	-		LRK54_RS11805	0.18	-0.8
2,615,421	-		LRK54_RS11805	0.18	+1.2
2,615,461	+		LRK54_RS11805	0.20	-1.8
2,615,462	-		LRK54_RS11805	0.20	-1.2
2,615,462	-		LRK54_RS11805	0.20	+0.7
2,615,518	+		LRK54_RS11805	0.23	-1.0
2,615,518	+		LRK54_RS11805	0.23	+0.2
2,615,519	-		LRK54_RS11805	0.23	-3.0
2,615,519	-		LRK54_RS11805	0.23	-0.1
2,615,668	+		LRK54_RS11805	0.30	-0.7
2,615,668	+		LRK54_RS11805	0.30	-2.4
2,615,668	+		LRK54_RS11805	0.30	-1.7
2,615,668	+		LRK54_RS11805	0.30	-1.4
2,615,668	+		LRK54_RS11805	0.30	-1.6
2,615,668	+		LRK54_RS11805	0.30	-1.1
2,615,668	+		LRK54_RS11805	0.30	+0.2
2,615,668	+		LRK54_RS11805	0.30	+0.2
2,615,668	+		LRK54_RS11805	0.30	+0.4
2,615,668	+		LRK54_RS11805	0.30	-1.5
2,615,668	+		LRK54_RS11805	0.30	-1.7
2,615,668	+		LRK54_RS11805	0.30	-0.5
2,615,668	+		LRK54_RS11805	0.30	-0.6
2,615,668	+		LRK54_RS11805	0.30	+0.9
2,615,669	-		LRK54_RS11805	0.30	-1.1
2,615,669	-		LRK54_RS11805	0.30	-1.0
2,615,669	-		LRK54_RS11805	0.30	-1.4
2,615,669	-		LRK54_RS11805	0.30	-0.7
2,615,669	-		LRK54_RS11805	0.30	+1.2
2,615,669	-		LRK54_RS11805	0.30	-1.8
2,615,669	-		LRK54_RS11805	0.30	+2.2
2,615,669	-		LRK54_RS11805	0.30	+0.3
2,615,669	-		LRK54_RS11805	0.30	+0.4
2,615,669	-		LRK54_RS11805	0.30	-1.9
2,615,669	-		LRK54_RS11805	0.30	-1.3
2,615,669	-		LRK54_RS11805	0.30	-1.1
2,615,669	-		LRK54_RS11805	0.30	-1.2
2,615,669	-		LRK54_RS11805	0.30	-0.9
2,616,158	+		LRK54_RS11805	0.53	+0.2
2,616,158	+		LRK54_RS11805	0.53	-0.5
2,616,158	+		LRK54_RS11805	0.53	-1.2
2,616,158	+		LRK54_RS11805	0.53	-2.3
2,616,158	+		LRK54_RS11805	0.53	-1.8
2,616,158	+		LRK54_RS11805	0.53	-1.9
2,616,158	+		LRK54_RS11805	0.53	-0.3
2,616,158	+		LRK54_RS11805	0.53	-0.6
2,616,158	+		LRK54_RS11805	0.53	-1.1
2,616,158	+		LRK54_RS11805	0.53	-1.7
2,616,158	+		LRK54_RS11805	0.53	-0.0
2,616,158	+		LRK54_RS11805	0.53	+0.2
2,616,159	-		LRK54_RS11805	0.53	-2.8
2,616,159	-		LRK54_RS11805	0.53	-1.3
2,616,159	-		LRK54_RS11805	0.53	-0.8
2,616,385	+		LRK54_RS11805	0.64	-3.3
2,616,385	+		LRK54_RS11805	0.64	-1.1
2,616,385	+		LRK54_RS11805	0.64	-1.7
2,616,386	-		LRK54_RS11805	0.64	+0.9
2,616,386	-		LRK54_RS11805	0.64	-0.3
2,616,386	-		LRK54_RS11805	0.64	-2.4
2,616,386	-		LRK54_RS11805	0.64	+0.6
2,616,386	-		LRK54_RS11805	0.64	-1.0
2,616,523	+		LRK54_RS11805	0.70	-2.0
2,616,523	+		LRK54_RS11805	0.70	-0.4
2,616,523	+		LRK54_RS11805	0.70	+2.2
2,616,523	+		LRK54_RS11805	0.70	-0.5
2,616,523	+		LRK54_RS11805	0.70	+1.2
2,616,523	+		LRK54_RS11805	0.70	-1.7
2,616,523	+		LRK54_RS11805	0.70	-2.0
2,616,523	+		LRK54_RS11805	0.70	-2.0
2,616,524	-		LRK54_RS11805	0.71	-4.7
2,616,524	-		LRK54_RS11805	0.71	-1.1
2,616,524	-		LRK54_RS11805	0.71	+0.2
2,616,524	-		LRK54_RS11805	0.71	-3.4
2,616,524	-		LRK54_RS11805	0.71	-0.2
2,616,856	+		LRK54_RS11805	0.86	-2.0
2,616,856	+		LRK54_RS11805	0.86	-1.4
2,616,856	+		LRK54_RS11805	0.86	-1.0
2,616,856	+		LRK54_RS11805	0.86	-1.3
2,616,856	+		LRK54_RS11805	0.86	-0.4
2,616,856	+		LRK54_RS11805	0.86	-1.7
2,616,857	-		LRK54_RS11805	0.86	+0.2
2,616,857	-		LRK54_RS11805	0.86	-0.8
2,616,857	-		LRK54_RS11805	0.86	-0.6
2,617,005	+				-2.8
2,617,132	+				-0.4
2,617,132	+				-2.4
2,617,133	-				-0.6
2,617,133	-				-1.0
2,617,133	-				+2.3
2,617,165	+				-0.2
2,617,165	+				-0.0
2,617,165	+				+0.0
2,617,165	+				-1.4
2,617,165	+				-2.0
2,617,165	+				-0.0
2,617,165	+				-2.8
2,617,165	+				-1.3
2,617,165	+				-0.7
2,617,165	+				-0.0
2,617,165	+				-1.3
2,617,165	+				+0.9
2,617,165	+				+0.2
2,617,165	+				+0.6
2,617,165	+				-0.1
2,617,165	+				-0.5
2,617,165	+				-0.6
2,617,165	+				+0.7
2,617,166	-				-0.8
2,617,166	-				-0.7
2,617,166	-				-1.0
2,617,166	-				+0.2
2,617,166	-				-1.1
2,617,166	-				-0.9
2,617,166	-				-0.6
2,617,166	-				-1.4
2,617,166	-				-1.5
2,617,166	-				+0.1
2,617,166	-				+0.8
2,617,166	-				+1.2
2,617,166	-				-0.6
2,617,166	-				-0.1
2,617,166	-				-3.0
2,617,166	-				-0.4
2,617,166	-				-0.5
2,617,166	-				-1.0
2,617,166	-				+0.3
2,617,166	-				-0.1
2,617,166	-				+0.5
2,617,166	-				-1.3
2,617,166	-				-1.7
2,617,166	-				+2.0
2,617,266	+				+0.0
2,617,266	+				-0.7
2,617,266	+				+0.5
2,617,267	-				+1.0
2,617,267	-				-0.3
2,617,267	-				+0.2
2,617,267	-				-1.0
2,617,267	-				+0.9
2,617,267	-				+1.5
2,617,295	+		LRK54_RS11810	0.10	+0.5
2,617,295	+		LRK54_RS11810	0.10	+1.2
2,617,296	-		LRK54_RS11810	0.11	+0.2
2,617,876	-		LRK54_RS11810	0.73	-1.9
2,617,876	-		LRK54_RS11810	0.73	-0.8
2,617,876	-		LRK54_RS11810	0.73	+0.1
2,617,876	-		LRK54_RS11810	0.73	+0.9
2,617,876	-		LRK54_RS11810	0.73	+0.8
2,617,876	-		LRK54_RS11810	0.73	+3.0
2,617,876	-		LRK54_RS11810	0.73	+0.2
2,617,876	-		LRK54_RS11810	0.73	-0.8
2,617,876	-		LRK54_RS11810	0.73	+0.2
2,617,876	-		LRK54_RS11810	0.73	+2.1