Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06720

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
1,656,894	-		CA265_RS06715	0.39	+0.0
1,656,896	-		CA265_RS06715	0.40	+0.2
1,656,952	+		CA265_RS06715	0.44	-0.5
1,656,974	+		CA265_RS06715	0.45	-1.3
1,657,001	-		CA265_RS06715	0.47	+0.0
1,657,036	+		CA265_RS06715	0.50	-0.2
1,657,036	+		CA265_RS06715	0.50	-0.6
1,657,037	-		CA265_RS06715	0.50	-0.2
1,657,076	-		CA265_RS06715	0.52	-0.3
1,657,193	+		CA265_RS06715	0.61	+1.0
1,657,194	-		CA265_RS06715	0.61	+0.1
1,657,194	-		CA265_RS06715	0.61	-0.3
1,657,201	-		CA265_RS06715	0.61	-0.5
1,657,243	+		CA265_RS06715	0.64	-0.8
1,657,324	+		CA265_RS06715	0.70	-0.6
1,657,326	+		CA265_RS06715	0.70	-0.7
1,657,336	+		CA265_RS06715	0.71	-0.6
1,657,437	-		CA265_RS06715	0.78	-0.4
1,657,474	-		CA265_RS06715	0.81	-0.4
1,657,654	-				+0.7
1,657,702	+				-0.3
1,657,750	-				-0.2
1,657,772	+				+0.2
1,657,772	+				+0.4
1,657,773	-				-0.1
1,657,773	-				-1.5
1,657,773	-				-0.6
1,657,840	-				-1.0
1,657,921	-		CA265_RS06720	0.36	+0.4
1,657,921	-		CA265_RS06720	0.36	-0.7
1,657,941	-		CA265_RS06720	0.47	-1.6
1,657,942	+		CA265_RS06720	0.47	-0.9
1,657,965	-		CA265_RS06720	0.59	-2.9
1,658,043	+				-1.2
1,658,044	-				-0.3
1,658,044	-				+0.7
1,658,064	-				-0.7
1,658,165	+				+0.1
1,658,223	-				-0.3
1,658,223	-				-0.4
1,658,235	-				-0.0
1,658,338	-				-0.7
1,658,387	+				-0.3
1,658,388	-				-0.2
1,658,388	-				-0.2
1,658,388	-				+0.1
1,658,409	+				+0.0
1,658,416	+				-0.4
1,658,419	-				-0.0
1,658,486	+		CA265_RS06725	0.11	+0.5
1,658,506	+		CA265_RS06725	0.12	-0.2
1,658,507	-		CA265_RS06725	0.12	-0.4
1,658,507	-		CA265_RS06725	0.12	+0.2
1,658,507	-		CA265_RS06725	0.12	+1.0
1,658,538	-		CA265_RS06725	0.13	+0.9
1,658,575	+		CA265_RS06725	0.15	+1.0
1,658,654	+		CA265_RS06725	0.18	-0.1
1,658,655	-		CA265_RS06725	0.18	+0.2
1,658,655	-		CA265_RS06725	0.18	+0.1
1,658,781	+		CA265_RS06725	0.24	+0.2
1,658,795	+		CA265_RS06725	0.25	+0.5
1,658,795	+		CA265_RS06725	0.25	+0.7
1,658,803	-				+1.0
1,658,805	-		CA265_RS06725	0.25	+0.2
1,658,826	+		CA265_RS06725	0.26	+0.2
1,658,830	-		CA265_RS06725	0.26	-0.4
1,658,862	+		CA265_RS06725	0.27	+0.1
1,658,986	+		CA265_RS06725	0.33	-3.0
1,658,986	+		CA265_RS06725	0.33	-0.0
1,658,987	-		CA265_RS06725	0.33	-0.7
1,659,011	+		CA265_RS06725	0.34	-0.6
1,659,012	-		CA265_RS06725	0.34	-1.0