Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30835 and AZOBR_RS30840 are separated by 25 nucleotides
AZOBR_RS30835: AZOBR_RS30835 - PTS fructose transporter subunit IIBC, at 282,037 to 283,791
_RS30835
AZOBR_RS30840: AZOBR_RS30840 - hypothetical protein, at 283,817 to 284,788
_RS30840
Position (kb) 282
283
284 Strain fitness (log2 ratio) -1
0
1 at 281.769 kb on + strand at 282.104 kb on + strand at 282.104 kb on + strand at 282.105 kb on - strand at 282.105 kb on - strand at 282.105 kb on - strand at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.422 kb on + strand, within AZOBR_RS30835 at 282.423 kb on - strand, within AZOBR_RS30835 at 282.423 kb on - strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.458 kb on + strand, within AZOBR_RS30835 at 282.459 kb on - strand, within AZOBR_RS30835 at 282.605 kb on + strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.606 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.720 kb on - strand, within AZOBR_RS30835 at 282.830 kb on + strand, within AZOBR_RS30835 at 282.831 kb on - strand, within AZOBR_RS30835 at 282.839 kb on + strand, within AZOBR_RS30835 at 283.818 kb on + strand at 284.304 kb on + strand, within AZOBR_RS30840 at 284.304 kb on + strand, within AZOBR_RS30840
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 281,769 + +0.5 282,104 + +0.0 282,104 + -0.8 282,105 - +0.6 282,105 - +0.0 282,105 - +0.6 282,422 + AZOBR_RS30835 0.22 -0.5 282,422 + AZOBR_RS30835 0.22 -0.9 282,422 + AZOBR_RS30835 0.22 -0.1 282,422 + AZOBR_RS30835 0.22 -0.6 282,422 + AZOBR_RS30835 0.22 +0.4 282,423 - AZOBR_RS30835 0.22 +1.0 282,423 - AZOBR_RS30835 0.22 +0.2 282,458 + AZOBR_RS30835 0.24 -0.6 282,458 + AZOBR_RS30835 0.24 -0.1 282,458 + AZOBR_RS30835 0.24 +0.8 282,459 - AZOBR_RS30835 0.24 +0.7 282,605 + AZOBR_RS30835 0.32 -0.4 282,606 - AZOBR_RS30835 0.32 -0.3 282,606 - AZOBR_RS30835 0.32 +0.2 282,606 - AZOBR_RS30835 0.32 -0.5 282,606 - AZOBR_RS30835 0.32 +1.0 282,720 - AZOBR_RS30835 0.39 +0.0 282,720 - AZOBR_RS30835 0.39 -0.9 282,720 - AZOBR_RS30835 0.39 +0.2 282,720 - AZOBR_RS30835 0.39 +0.0 282,830 + AZOBR_RS30835 0.45 +0.0 282,831 - AZOBR_RS30835 0.45 +0.6 282,839 + AZOBR_RS30835 0.46 -0.8 283,818 + +0.8 284,304 + AZOBR_RS30840 0.50 +0.3 284,304 + AZOBR_RS30840 0.50 +1.3
Or see this region's nucleotide sequence