Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23020 and AZOBR_RS23025 are separated by 11 nucleotides AZOBR_RS23025 and AZOBR_RS23030 overlap by 1 nucleotides
AZOBR_RS23020: AZOBR_RS23020 - ABC transporter permease, at 179,049 to 180,029
_RS23020
AZOBR_RS23025: AZOBR_RS23025 - ABC transporter permease, at 180,041 to 180,898
_RS23025
AZOBR_RS23030: AZOBR_RS23030 - ABC transporter ATP-binding protein, at 180,898 to 182,562
_RS23030
Position (kb) 180
181 Strain fitness (log2 ratio) -2
-1
0
1
2 at 179.066 kb on - strand at 179.066 kb on - strand at 179.066 kb on - strand at 179.247 kb on + strand, within AZOBR_RS23020 at 179.248 kb on - strand, within AZOBR_RS23020 at 179.265 kb on + strand, within AZOBR_RS23020 at 179.265 kb on + strand, within AZOBR_RS23020 at 179.265 kb on + strand, within AZOBR_RS23020 at 179.265 kb on + strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.266 kb on - strand, within AZOBR_RS23020 at 179.299 kb on - strand, within AZOBR_RS23020 at 179.299 kb on - strand, within AZOBR_RS23020 at 179.304 kb on + strand, within AZOBR_RS23020 at 179.584 kb on - strand, within AZOBR_RS23020 at 179.655 kb on + strand, within AZOBR_RS23020 at 179.655 kb on + strand, within AZOBR_RS23020 at 179.656 kb on - strand, within AZOBR_RS23020 at 179.656 kb on - strand, within AZOBR_RS23020 at 179.656 kb on - strand, within AZOBR_RS23020 at 179.656 kb on - strand, within AZOBR_RS23020 at 179.667 kb on + strand, within AZOBR_RS23020 at 179.667 kb on + strand, within AZOBR_RS23020 at 179.668 kb on - strand at 179.917 kb on - strand, within AZOBR_RS23020 at 179.917 kb on - strand, within AZOBR_RS23020 at 179.992 kb on - strand at 179.992 kb on - strand at 179.992 kb on - strand at 179.992 kb on - strand at 180.740 kb on + strand, within AZOBR_RS23025 at 180.740 kb on + strand, within AZOBR_RS23025 at 180.740 kb on + strand, within AZOBR_RS23025 at 180.740 kb on + strand, within AZOBR_RS23025 at 180.741 kb on - strand, within AZOBR_RS23025 at 180.741 kb on - strand, within AZOBR_RS23025 at 180.741 kb on - strand, within AZOBR_RS23025 at 181.259 kb on - strand, within AZOBR_RS23030 at 181.651 kb on + strand, within AZOBR_RS23030 at 181.652 kb on - strand, within AZOBR_RS23030 at 181.652 kb on - strand, within AZOBR_RS23030
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 179,066 - -0.1 179,066 - -0.0 179,066 - +0.3 179,247 + AZOBR_RS23020 0.20 -0.6 179,248 - AZOBR_RS23020 0.20 +2.0 179,265 + AZOBR_RS23020 0.22 -1.9 179,265 + AZOBR_RS23020 0.22 -0.4 179,265 + AZOBR_RS23020 0.22 +0.4 179,265 + AZOBR_RS23020 0.22 +0.3 179,266 - AZOBR_RS23020 0.22 -1.1 179,266 - AZOBR_RS23020 0.22 -0.1 179,266 - AZOBR_RS23020 0.22 +1.0 179,266 - AZOBR_RS23020 0.22 +1.0 179,266 - AZOBR_RS23020 0.22 -0.7 179,266 - AZOBR_RS23020 0.22 -0.6 179,299 - AZOBR_RS23020 0.25 +0.1 179,299 - AZOBR_RS23020 0.25 -1.2 179,304 + AZOBR_RS23020 0.26 +0.3 179,584 - AZOBR_RS23020 0.55 -0.5 179,655 + AZOBR_RS23020 0.62 -0.4 179,655 + AZOBR_RS23020 0.62 -0.3 179,656 - AZOBR_RS23020 0.62 +0.4 179,656 - AZOBR_RS23020 0.62 -0.6 179,656 - AZOBR_RS23020 0.62 -0.5 179,656 - AZOBR_RS23020 0.62 -0.8 179,667 + AZOBR_RS23020 0.63 +0.8 179,667 + AZOBR_RS23020 0.63 +0.3 179,668 - +0.4 179,917 - AZOBR_RS23020 0.88 -0.6 179,917 - AZOBR_RS23020 0.88 -0.2 179,992 - +0.7 179,992 - -0.1 179,992 - -0.9 179,992 - -0.0 180,740 + AZOBR_RS23025 0.81 +0.1 180,740 + AZOBR_RS23025 0.81 +0.5 180,740 + AZOBR_RS23025 0.81 +1.3 180,740 + AZOBR_RS23025 0.81 -0.0 180,741 - AZOBR_RS23025 0.82 +0.1 180,741 - AZOBR_RS23025 0.82 +0.4 180,741 - AZOBR_RS23025 0.82 -0.0 181,259 - AZOBR_RS23030 0.22 -0.2 181,651 + AZOBR_RS23030 0.45 -0.6 181,652 - AZOBR_RS23030 0.45 -0.4 181,652 - AZOBR_RS23030 0.45 -0.6
Or see this region's nucleotide sequence