Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02800 and AZOBR_RS02805 are separated by 325 nucleotides AZOBR_RS02805 and AZOBR_RS02810 are separated by 741 nucleotides
AZOBR_RS02800: AZOBR_RS02800 - partition protein (ParA), at 594,181 to 594,807
_RS02800
AZOBR_RS02805: AZOBR_RS02805 - hypothetical protein, at 595,133 to 595,927
_RS02805
AZOBR_RS02810: AZOBR_RS02810 - hypothetical protein, at 596,669 to 596,974
_RS02810
Position (kb) 595
596 Strain fitness (log2 ratio) -2
-1
0
1 at 594.212 kb on + strand at 594.212 kb on + strand at 594.212 kb on + strand at 594.212 kb on + strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.213 kb on - strand at 594.431 kb on + strand, within AZOBR_RS02800 at 594.431 kb on + strand, within AZOBR_RS02800 at 594.431 kb on + strand, within AZOBR_RS02800 at 594.431 kb on + strand, within AZOBR_RS02800 at 594.671 kb on + strand, within AZOBR_RS02800 at 594.671 kb on + strand, within AZOBR_RS02800 at 594.671 kb on + strand, within AZOBR_RS02800 at 594.671 kb on - strand, within AZOBR_RS02800 at 594.672 kb on - strand, within AZOBR_RS02800 at 594.672 kb on - strand, within AZOBR_RS02800 at 594.672 kb on - strand, within AZOBR_RS02800 at 594.672 kb on - strand, within AZOBR_RS02800 at 594.920 kb on + strand at 594.920 kb on + strand at 594.920 kb on + strand at 594.920 kb on + strand at 594.920 kb on + strand at 594.920 kb on + strand at 594.920 kb on + strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.921 kb on - strand at 594.924 kb on + strand at 594.924 kb on + strand at 594.925 kb on - strand at 594.925 kb on - strand at 594.925 kb on - strand at 594.925 kb on - strand at 594.928 kb on - strand at 594.928 kb on - strand at 594.928 kb on - strand at 594.959 kb on + strand at 594.960 kb on - strand at 595.224 kb on + strand, within AZOBR_RS02805 at 595.224 kb on + strand, within AZOBR_RS02805 at 595.225 kb on - strand, within AZOBR_RS02805 at 595.225 kb on - strand, within AZOBR_RS02805 at 595.225 kb on - strand, within AZOBR_RS02805 at 595.225 kb on - strand, within AZOBR_RS02805 at 595.225 kb on - strand, within AZOBR_RS02805 at 595.456 kb on + strand, within AZOBR_RS02805 at 595.457 kb on - strand, within AZOBR_RS02805 at 595.457 kb on - strand, within AZOBR_RS02805 at 595.457 kb on - strand, within AZOBR_RS02805 at 595.464 kb on + strand, within AZOBR_RS02805 at 595.464 kb on + strand, within AZOBR_RS02805 at 595.465 kb on - strand, within AZOBR_RS02805 at 595.910 kb on + strand at 596.049 kb on - strand at 596.545 kb on + strand at 596.545 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.608 kb on + strand at 596.820 kb on - strand, within AZOBR_RS02810
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 594,212 + +1.1 594,212 + -0.4 594,212 + +0.5 594,212 + -1.0 594,213 - +0.6 594,213 - +0.7 594,213 - +0.2 594,213 - +0.7 594,213 - +0.9 594,213 - +0.4 594,213 - +0.3 594,213 - -0.6 594,431 + AZOBR_RS02800 0.40 +0.8 594,431 + AZOBR_RS02800 0.40 +0.1 594,431 + AZOBR_RS02800 0.40 -0.1 594,431 + AZOBR_RS02800 0.40 -0.4 594,671 + AZOBR_RS02800 0.78 -0.7 594,671 + AZOBR_RS02800 0.78 -0.5 594,671 + AZOBR_RS02800 0.78 +0.2 594,671 - AZOBR_RS02800 0.78 -2.7 594,672 - AZOBR_RS02800 0.78 -0.7 594,672 - AZOBR_RS02800 0.78 -0.9 594,672 - AZOBR_RS02800 0.78 -0.1 594,672 - AZOBR_RS02800 0.78 -0.1 594,920 + +0.5 594,920 + -0.1 594,920 + -0.1 594,920 + -0.3 594,920 + -0.6 594,920 + +0.7 594,920 + +0.0 594,921 - -2.0 594,921 - -0.8 594,921 - +0.4 594,921 - +0.4 594,921 - +0.4 594,921 - -1.0 594,921 - -0.3 594,921 - -0.9 594,921 - -0.4 594,921 - -0.5 594,921 - +0.1 594,921 - +0.9 594,924 + -0.1 594,924 + +0.1 594,925 - -0.3 594,925 - -0.4 594,925 - +0.0 594,925 - -1.4 594,928 - -0.3 594,928 - -0.1 594,928 - +0.3 594,959 + -0.1 594,960 - -0.1 595,224 + AZOBR_RS02805 0.11 -0.9 595,224 + AZOBR_RS02805 0.11 -0.4 595,225 - AZOBR_RS02805 0.12 -1.3 595,225 - AZOBR_RS02805 0.12 -0.6 595,225 - AZOBR_RS02805 0.12 -0.5 595,225 - AZOBR_RS02805 0.12 -1.4 595,225 - AZOBR_RS02805 0.12 -0.5 595,456 + AZOBR_RS02805 0.41 -0.6 595,457 - AZOBR_RS02805 0.41 -2.3 595,457 - AZOBR_RS02805 0.41 -0.4 595,457 - AZOBR_RS02805 0.41 +0.3 595,464 + AZOBR_RS02805 0.42 -0.9 595,464 + AZOBR_RS02805 0.42 +0.3 595,465 - AZOBR_RS02805 0.42 -0.1 595,910 + -1.4 596,049 - -0.5 596,545 + +0.3 596,545 + +0.6 596,608 + -0.4 596,608 + +0.2 596,608 + -1.0 596,608 + -0.4 596,820 - AZOBR_RS02810 0.49 +0.2
Or see this region's nucleotide sequence