Experiment: Parabanic Acid (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02465 and AZOBR_RS02470 are separated by 321 nucleotides AZOBR_RS02470 and AZOBR_RS02475 are separated by 48 nucleotides
AZOBR_RS02465: AZOBR_RS02465 - endonuclease, at 511,481 to 512,191
_RS02465
AZOBR_RS02470: AZOBR_RS02470 - esterase, at 512,513 to 513,733
_RS02470
AZOBR_RS02475: AZOBR_RS02475 - heme A synthase, at 513,782 to 514,867
_RS02475
Position (kb) 512
513
514 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 512.084 kb on + strand, within AZOBR_RS02465 at 512.114 kb on + strand, within AZOBR_RS02465 at 512.115 kb on - strand, within AZOBR_RS02465 at 512.350 kb on + strand at 512.351 kb on - strand at 512.461 kb on + strand at 512.461 kb on + strand at 512.462 kb on - strand at 512.520 kb on - strand at 512.528 kb on + strand at 512.618 kb on + strand at 512.619 kb on - strand at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.972 kb on + strand, within AZOBR_RS02470 at 512.973 kb on - strand, within AZOBR_RS02470 at 513.230 kb on + strand, within AZOBR_RS02470 at 513.383 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand, within AZOBR_RS02470 at 513.392 kb on + strand at 513.393 kb on - strand, within AZOBR_RS02470 at 513.393 kb on - strand, within AZOBR_RS02470 at 513.620 kb on - strand at 513.620 kb on - strand at 513.657 kb on - strand at 513.657 kb on - strand at 513.740 kb on + strand at 513.881 kb on + strand at 514.155 kb on + strand, within AZOBR_RS02475 at 514.323 kb on + strand, within AZOBR_RS02475 at 514.323 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.407 kb on + strand, within AZOBR_RS02475 at 514.408 kb on - strand, within AZOBR_RS02475 at 514.408 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.609 kb on - strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475 at 514.635 kb on + strand, within AZOBR_RS02475
Per-strain Table
Position Strand Gene LocusTag Fraction Parabanic Acid (N) remove 512,084 + AZOBR_RS02465 0.85 +0.4 512,114 + AZOBR_RS02465 0.89 +0.2 512,115 - AZOBR_RS02465 0.89 -0.2 512,350 + -0.0 512,351 - -2.1 512,461 + +3.4 512,461 + +0.2 512,462 - +0.7 512,520 - +0.4 512,528 + -0.3 512,618 + -0.5 512,619 - -0.3 512,972 + AZOBR_RS02470 0.38 -1.3 512,972 + AZOBR_RS02470 0.38 +0.1 512,972 + AZOBR_RS02470 0.38 -0.5 512,972 + AZOBR_RS02470 0.38 -0.1 512,973 - AZOBR_RS02470 0.38 +0.3 513,230 + AZOBR_RS02470 0.59 +0.1 513,383 + AZOBR_RS02470 0.71 +0.3 513,392 + AZOBR_RS02470 0.72 -0.1 513,392 + AZOBR_RS02470 0.72 +0.1 513,392 + AZOBR_RS02470 0.72 +1.1 513,392 + +2.0 513,393 - AZOBR_RS02470 0.72 +0.5 513,393 - AZOBR_RS02470 0.72 +0.3 513,620 - -0.0 513,620 - +0.2 513,657 - -0.6 513,657 - +0.5 513,740 + -0.3 513,881 + +0.1 514,155 + AZOBR_RS02475 0.34 +0.7 514,323 + AZOBR_RS02475 0.50 +1.1 514,323 + AZOBR_RS02475 0.50 +0.3 514,407 + AZOBR_RS02475 0.58 +0.2 514,407 + AZOBR_RS02475 0.58 +1.3 514,407 + AZOBR_RS02475 0.58 +0.8 514,408 - AZOBR_RS02475 0.58 +1.4 514,408 - AZOBR_RS02475 0.58 +0.8 514,609 - AZOBR_RS02475 0.76 +1.6 514,609 - AZOBR_RS02475 0.76 +0.0 514,609 - AZOBR_RS02475 0.76 +1.4 514,635 + AZOBR_RS02475 0.79 +1.4 514,635 + AZOBR_RS02475 0.79 +1.5 514,635 + AZOBR_RS02475 0.79 +0.4
Or see this region's nucleotide sequence