Strain Fitness in Shewanella loihica PV-4 around Shew_3355

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
4,000,297	-		Shew_3354	0.68	-0.0
4,000,305	-		Shew_3354	0.68	+1.1
4,000,464	+		Shew_3354	0.75	+0.3
4,000,472	+		Shew_3354	0.76	+0.0
4,000,480	-		Shew_3354	0.76	+0.8
4,000,480	-		Shew_3354	0.76	-2.2
4,000,499	+		Shew_3354	0.77	+0.1
4,000,993	+				+0.6
4,001,004	+				+1.8
4,001,020	+				+0.0
4,001,160	-				-0.0
4,001,163	+				-0.3
4,001,171	-				-0.4
4,001,447	-		Shew_3355	0.28	-0.4
4,001,600	-		Shew_3355	0.40	+0.2
4,001,600	-		Shew_3355	0.40	+0.0
4,001,600	-		Shew_3355	0.40	-0.7
4,001,672	+		Shew_3355	0.46	+0.2
4,001,721	+		Shew_3355	0.50	-0.2
4,001,916	-		Shew_3355	0.66	-0.7
4,001,942	+		Shew_3355	0.68	-0.3
4,001,942	+		Shew_3355	0.68	+0.2
4,002,027	-		Shew_3355	0.75	+0.2
4,002,126	+		Shew_3355	0.83	-1.0
4,002,302	-				-0.6
4,002,850	+				-0.1
4,002,965	-				-0.1
4,003,112	-				-0.6