Strain Fitness in Shewanella loihica PV-4 around Shew_2196

Experiment: Cisplatin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 1 mg/ml
2,554,361	-		Shew_2195	0.38	-0.0
2,554,407	+		Shew_2195	0.42	+0.6
2,554,407	+		Shew_2195	0.42	+0.4
2,554,415	-		Shew_2195	0.42	-0.2
2,554,455	+		Shew_2195	0.45	-0.0
2,554,491	+		Shew_2195	0.48	+0.4
2,554,499	-		Shew_2195	0.49	+0.3
2,554,620	+		Shew_2195	0.58	+0.1
2,554,758	+		Shew_2195	0.69	+0.2
2,555,182	+				-0.3
2,555,675	-		Shew_2196	0.26	-2.4
2,555,794	-		Shew_2196	0.32	-2.4
2,555,832	+		Shew_2196	0.34	-2.1
2,556,569	-		Shew_2196	0.72	-1.4
2,557,083	-				-1.8
2,557,324	-				+0.0
2,557,760	+	hisG	Shew_2197	0.20	+0.7
2,557,832	+	hisG	Shew_2197	0.28	-0.3
2,558,086	+	hisG	Shew_2197	0.57	-0.8