Strain Fitness in Shewanella loihica PV-4 around Shew_0906
Experiment: Cisplatin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cisplatin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,026,751 | - | Shew_0905 | 0.15 | -0.0 | |
| 1,026,965 | + | Shew_0905 | 0.33 | +0.4 | |
| 1,027,019 | + | Shew_0905 | 0.38 | -0.1 | |
| 1,027,492 | - | Shew_0905 | 0.78 | -0.4 | |
| 1,027,978 | - | Shew_0906 | 0.67 | -0.1 | |
| 1,027,993 | - | Shew_0906 | 0.71 | -0.8 | |
| 1,028,347 | + | -0.1 | |||
| 1,028,471 | - | Shew_0907 | 0.14 | +0.3 | |
| 1,028,563 | + | Shew_0907 | 0.18 | -0.2 | |
| 1,028,563 | + | Shew_0907 | 0.18 | +0.1 | |
| 1,028,571 | - | Shew_0907 | 0.18 | +0.4 | |
| 1,028,572 | + | Shew_0907 | 0.18 | +0.1 | |
| 1,028,611 | + | Shew_0907 | 0.19 | -0.2 | |
| 1,028,623 | - | Shew_0907 | 0.20 | +0.1 | |
| 1,028,957 | - | Shew_0907 | 0.32 | +0.2 | |
| 1,028,957 | - | Shew_0907 | 0.32 | +0.4 | |
| 1,029,030 | + | Shew_0907 | 0.34 | +0.2 | |
| 1,029,038 | - | Shew_0907 | 0.35 | -1.0 | |
| 1,029,038 | - | Shew_0907 | 0.35 | +2.1 | |
| 1,029,061 | + | Shew_0907 | 0.36 | -0.0 |
Or see this region's nucleotide sequence