Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2515

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,593,203	-				-1.6
2,593,207	+				-0.5
2,594,153	+				+1.8
2,594,153	+				+0.2
2,594,153	+				+1.1
2,594,153	+				+0.1
2,594,153	+				-0.5
2,594,153	+				-0.4
2,594,161	-				+0.1
2,594,171	-				+0.4
2,594,176	-				-2.4
2,594,201	+				-2.4
2,594,209	-				-3.7
2,594,223	+				+1.4
2,594,239	+				+1.7
2,594,264	-				-1.5
2,594,272	-				-2.9
2,594,279	+				-2.2
2,594,291	+				+0.5
2,594,330	+				-0.5
2,594,330	+				-0.8
2,594,330	+				-0.6
2,594,330	+				-0.6
2,594,338	-				-1.3
2,594,338	-				-0.2
2,594,338	-				-0.4
2,594,348	-				-0.1
2,594,382	+				-0.5
2,594,382	-				+1.8
2,594,416	+				-1.9
2,594,423	-		Synpcc7942_2515	0.10	-0.7
2,594,429	+		Synpcc7942_2515	0.10	+0.3
2,594,441	-		Synpcc7942_2515	0.11	-1.2
2,594,455	+		Synpcc7942_2515	0.12	-2.1
2,594,455	+		Synpcc7942_2515	0.12	-1.9
2,594,486	-		Synpcc7942_2515	0.13	-5.1
2,594,493	-		Synpcc7942_2515	0.13	-0.1
2,594,545	-		Synpcc7942_2515	0.16	-1.2
2,594,570	+		Synpcc7942_2515	0.17	-3.4
2,594,574	+		Synpcc7942_2515	0.17	-0.8
2,594,607	+		Synpcc7942_2515	0.18	-1.8
2,594,607	+				-1.6
2,594,615	-		Synpcc7942_2515	0.19	-2.6
2,594,615	-		Synpcc7942_2515	0.19	+0.9
2,594,617	+		Synpcc7942_2515	0.19	-1.7
2,594,625	-		Synpcc7942_2515	0.19	-0.9
2,594,635	-		Synpcc7942_2515	0.20	-1.1
2,594,638	+		Synpcc7942_2515	0.20	-0.1
2,594,666	-		Synpcc7942_2515	0.21	-1.6
2,594,671	-		Synpcc7942_2515	0.21	-2.5
2,594,671	-		Synpcc7942_2515	0.21	+0.8
2,594,671	-		Synpcc7942_2515	0.21	+0.1
2,594,671	-		Synpcc7942_2515	0.21	-1.4
2,594,684	-		Synpcc7942_2515	0.22	+0.8
2,594,729	-		Synpcc7942_2515	0.24	+0.9
2,594,734	-		Synpcc7942_2515	0.24	-1.4
2,594,795	-		Synpcc7942_2515	0.27	-4.6
2,594,814	+		Synpcc7942_2515	0.27	+0.2
2,594,831	+		Synpcc7942_2515	0.28	-4.1
2,594,869	+		Synpcc7942_2515	0.30	-2.6
2,594,904	+		Synpcc7942_2515	0.31	-0.4
2,594,942	+		Synpcc7942_2515	0.33	-0.8
2,594,952	+		Synpcc7942_2515	0.34	+1.0
2,594,952	+		Synpcc7942_2515	0.34	-0.3
2,594,952	+		Synpcc7942_2515	0.34	+0.4
2,594,952	+		Synpcc7942_2515	0.34	+0.0
2,594,952	+		Synpcc7942_2515	0.34	+1.4
2,594,952	+		Synpcc7942_2515	0.34	+0.5
2,594,960	-		Synpcc7942_2515	0.34	-2.1
2,594,960	-		Synpcc7942_2515	0.34	+0.2
2,594,970	-		Synpcc7942_2515	0.34	-1.5
2,594,984	+		Synpcc7942_2515	0.35	+1.4
2,594,987	-		Synpcc7942_2515	0.35	-3.1
2,594,993	+		Synpcc7942_2515	0.35	-0.0
2,595,001	-		Synpcc7942_2515	0.36	+0.6
2,595,039	+		Synpcc7942_2515	0.37	-0.2
2,595,039	+		Synpcc7942_2515	0.37	-0.4
2,595,043	+		Synpcc7942_2515	0.38	-0.5
2,595,074	-		Synpcc7942_2515	0.39	+0.4
2,595,114	-				-1.9
2,595,137	-		Synpcc7942_2515	0.42	+0.1
2,595,153	+		Synpcc7942_2515	0.42	+3.0
2,595,155	-		Synpcc7942_2515	0.42	-0.3
2,595,159	-		Synpcc7942_2515	0.43	-2.6
2,595,163	+		Synpcc7942_2515	0.43	-0.9
2,595,176	+		Synpcc7942_2515	0.43	-1.2
2,595,176	+		Synpcc7942_2515	0.43	-2.8
2,595,176	+		Synpcc7942_2515	0.43	-3.6
2,595,184	-		Synpcc7942_2515	0.44	-2.5
2,595,184	-		Synpcc7942_2515	0.44	-0.1
2,595,184	-		Synpcc7942_2515	0.44	+0.7
2,595,197	-		Synpcc7942_2515	0.44	-0.4
2,595,210	+		Synpcc7942_2515	0.45	+0.9
2,595,211	+		Synpcc7942_2515	0.45	-2.6
2,595,212	+		Synpcc7942_2515	0.45	-0.4
2,595,217	+		Synpcc7942_2515	0.45	+0.3
2,595,218	-		Synpcc7942_2515	0.45	+0.2
2,595,230	+		Synpcc7942_2515	0.46	-0.0
2,595,232	+		Synpcc7942_2515	0.46	-1.8
2,595,248	-		Synpcc7942_2515	0.47	+0.7
2,595,267	+		Synpcc7942_2515	0.47	+0.0
2,595,286	-		Synpcc7942_2515	0.48	+0.4
2,595,368	+		Synpcc7942_2515	0.52	-1.6
2,595,371	-		Synpcc7942_2515	0.52	-2.8
2,595,384	+		Synpcc7942_2515	0.53	-0.1
2,595,392	-		Synpcc7942_2515	0.53	+1.0
2,595,397	-		Synpcc7942_2515	0.53	-1.6
2,595,438	+		Synpcc7942_2515	0.55	-0.6
2,595,460	-		Synpcc7942_2515	0.56	-2.4
2,595,462	+		Synpcc7942_2515	0.56	+0.3
2,595,464	+		Synpcc7942_2515	0.56	-1.7
2,595,530	+		Synpcc7942_2515	0.59	-3.8
2,595,534	+		Synpcc7942_2515	0.59	-2.7
2,595,538	-		Synpcc7942_2515	0.59	-2.9
2,595,538	-		Synpcc7942_2515	0.59	-1.1
2,595,542	+		Synpcc7942_2515	0.60	-2.3
2,595,584	-		Synpcc7942_2515	0.61	+0.6
2,595,594	+		Synpcc7942_2515	0.62	+2.4
2,595,602	-		Synpcc7942_2515	0.62	-0.3
2,595,602	-		Synpcc7942_2515	0.62	-0.6
2,595,613	-		Synpcc7942_2515	0.63	-2.4
2,595,639	+		Synpcc7942_2515	0.64	-0.1
2,595,644	+		Synpcc7942_2515	0.64	-1.4
2,595,652	-		Synpcc7942_2515	0.64	-2.6
2,595,652	-		Synpcc7942_2515	0.64	-1.8
2,595,652	-		Synpcc7942_2515	0.64	-3.7
2,595,652	-		Synpcc7942_2515	0.64	-1.1
2,595,666	-		Synpcc7942_2515	0.65	+0.1
2,595,673	+		Synpcc7942_2515	0.65	-0.8
2,595,685	+		Synpcc7942_2515	0.66	+0.9
2,595,685	+		Synpcc7942_2515	0.66	-1.6
2,595,685	+		Synpcc7942_2515	0.66	-2.6
2,595,693	-		Synpcc7942_2515	0.66	-4.0
2,595,701	-		Synpcc7942_2515	0.67	-2.6
2,595,705	+		Synpcc7942_2515	0.67	+0.3
2,595,708	-		Synpcc7942_2515	0.67	-1.7
2,595,734	-		Synpcc7942_2515	0.68	-3.5
2,595,734	-		Synpcc7942_2515	0.68	-3.7
2,595,742	+		Synpcc7942_2515	0.68	-2.1
2,595,750	-				-2.0
2,595,750	-		Synpcc7942_2515	0.69	+1.3
2,595,766	+				-1.6
2,595,769	-		Synpcc7942_2515	0.70	-2.7
2,595,796	+		Synpcc7942_2515	0.71	-0.7
2,595,796	+		Synpcc7942_2515	0.71	-1.7
2,595,796	-		Synpcc7942_2515	0.71	-0.6
2,595,804	-		Synpcc7942_2515	0.71	-3.3
2,595,822	-		Synpcc7942_2515	0.72	-3.7
2,595,827	+		Synpcc7942_2515	0.72	-0.3
2,595,832	+		Synpcc7942_2515	0.72	-0.1
2,595,832	+		Synpcc7942_2515	0.72	+0.7
2,595,832	+		Synpcc7942_2515	0.72	-0.6
2,595,835	-		Synpcc7942_2515	0.72	+0.7
2,595,835	-		Synpcc7942_2515	0.72	-0.6
2,595,840	-		Synpcc7942_2515	0.73	-2.1
2,595,840	-		Synpcc7942_2515	0.73	-0.6
2,595,840	-		Synpcc7942_2515	0.73	-0.9
2,595,871	-		Synpcc7942_2515	0.74	-2.0
2,595,875	-		Synpcc7942_2515	0.74	+1.2
2,595,877	+		Synpcc7942_2515	0.74	+0.4
2,595,906	+		Synpcc7942_2515	0.76	-4.1
2,595,914	-		Synpcc7942_2515	0.76	+0.2
2,595,935	+		Synpcc7942_2515	0.77	-2.9
2,595,935	+		Synpcc7942_2515	0.77	+1.9
2,595,943	-		Synpcc7942_2515	0.77	-2.2
2,595,985	-		Synpcc7942_2515	0.79	+4.1
2,595,990	+		Synpcc7942_2515	0.79	-2.5
2,595,998	-		Synpcc7942_2515	0.80	+0.3
2,596,001	-		Synpcc7942_2515	0.80	+0.9
2,596,012	+		Synpcc7942_2515	0.80	+0.4
2,596,020	-		Synpcc7942_2515	0.81	-0.6
2,596,065	-		Synpcc7942_2515	0.83	-1.5
2,596,088	+		Synpcc7942_2515	0.84	+0.3
2,596,103	-		Synpcc7942_2515	0.84	-2.4
2,596,112	-		Synpcc7942_2515	0.85	+0.6
2,596,122	-		Synpcc7942_2515	0.85	-2.8
2,596,125	+		Synpcc7942_2515	0.85	-0.8
2,596,151	+		Synpcc7942_2515	0.86	+2.4
2,596,157	+		Synpcc7942_2515	0.87	+1.0
2,596,158	-		Synpcc7942_2515	0.87	-0.3
2,596,159	-		Synpcc7942_2515	0.87	-3.8
2,596,159	-		Synpcc7942_2515	0.87	-3.1
2,596,165	-		Synpcc7942_2515	0.87	+1.1
2,596,174	-		Synpcc7942_2515	0.87	-1.3
2,596,225	+		Synpcc7942_2515	0.90	+0.2
2,596,225	+		Synpcc7942_2515	0.90	-3.4
2,596,225	+		Synpcc7942_2515	0.90	-2.3
2,596,225	+		Synpcc7942_2515	0.90	-1.4
2,596,225	+		Synpcc7942_2515	0.90	+0.4
2,596,225	+		Synpcc7942_2515	0.90	-4.2
2,596,225	+		Synpcc7942_2515	0.90	-0.6
2,596,225	+		Synpcc7942_2515	0.90	-0.2
2,596,225	+		Synpcc7942_2515	0.90	-0.6
2,596,233	-				+0.5
2,596,233	-				-3.1
2,596,233	-				+1.4
2,596,233	-				-1.5
2,596,233	-				-1.3
2,596,233	-				-0.2
2,596,233	-				-0.4
2,596,247	+				-2.7
2,596,257	+				+1.4
2,596,257	-				+1.2
2,596,267	+				+0.4
2,596,291	+				-0.9
2,596,291	+				-3.6
2,596,299	-				-1.3
2,596,299	-				-3.7
2,596,340	+				-2.2
2,596,345	+				+0.4
2,596,348	-				+0.2
2,596,449	-				+1.8
2,596,483	-				+1.9
2,596,485	+				+1.6
2,596,485	-				+0.5
2,596,485	-				+1.0
2,596,503	-				+0.6
2,596,517	-				-2.0
2,596,522	-				+0.7
2,596,594	-	tRNA-Ala	Synpcc7942_R0018	0.14	+2.9
2,596,728	+				+1.0
2,596,823	+		Synpcc7942_2516	0.43	+0.8
2,596,834	+		Synpcc7942_2516	0.48	-0.4
2,596,862	-		Synpcc7942_2516	0.60	-0.9
2,596,869	+		Synpcc7942_2516	0.62	+1.1
2,596,887	-		Synpcc7942_2516	0.70	+1.3
2,596,901	+		Synpcc7942_2516	0.76	+0.9
2,596,982	-				+0.2
2,596,985	+				-0.2
2,596,986	+				+0.4
2,596,993	-				-0.7
2,596,993	-				+0.9
2,596,993	-				+0.3
2,596,993	-				-1.9
2,597,001	+				-0.9
2,597,001	-				-0.9
2,597,008	+				+1.1
2,597,008	+				-0.8
2,597,008	+				+1.0
2,597,013	+				+2.3
2,597,018	+				+1.4
2,597,021	-				-1.3
2,597,077	+				-1.8
2,597,141	-		Synpcc7942_2517	0.16	-2.8
2,597,144	+		Synpcc7942_2517	0.16	-0.1
2,597,183	+		Synpcc7942_2517	0.22	-1.5
2,597,183	+		Synpcc7942_2517	0.22	-2.6
2,597,216	+		Synpcc7942_2517	0.26	-2.8
2,597,272	-		Synpcc7942_2517	0.34	-3.6
2,597,287	+		Synpcc7942_2517	0.37	-2.4
2,597,427	+		Synpcc7942_2517	0.57	-3.8
2,597,454	+				-1.7
2,597,459	+		Synpcc7942_2517	0.61	-2.9