Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2499

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,578,777	+		Synpcc7942_2498	0.25	-0.9
2,578,801	+		Synpcc7942_2498	0.27	+1.5
2,578,811	+		Synpcc7942_2498	0.27	+0.2
2,578,815	+		Synpcc7942_2498	0.28	+2.6
2,578,833	-		Synpcc7942_2498	0.29	-2.8
2,578,834	+		Synpcc7942_2498	0.29	-0.3
2,578,835	+		Synpcc7942_2498	0.29	-2.2
2,578,870	+		Synpcc7942_2498	0.32	+1.4
2,578,878	-		Synpcc7942_2498	0.33	-1.0
2,578,883	-		Synpcc7942_2498	0.33	-3.5
2,578,890	-		Synpcc7942_2498	0.34	+1.1
2,578,954	+		Synpcc7942_2498	0.39	+0.4
2,578,982	+		Synpcc7942_2498	0.41	-0.6
2,578,993	+		Synpcc7942_2498	0.42	-2.9
2,579,015	+		Synpcc7942_2498	0.44	-0.6
2,579,015	+		Synpcc7942_2498	0.44	+1.9
2,579,023	-		Synpcc7942_2498	0.44	+0.6
2,579,098	-		Synpcc7942_2498	0.50	+0.1
2,579,106	+		Synpcc7942_2498	0.51	+1.2
2,579,133	-		Synpcc7942_2498	0.53	+1.4
2,579,159	+		Synpcc7942_2498	0.55	+0.5
2,579,164	+		Synpcc7942_2498	0.56	+1.2
2,579,164	+		Synpcc7942_2498	0.56	+2.4
2,579,164	+		Synpcc7942_2498	0.56	+0.8
2,579,172	-		Synpcc7942_2498	0.56	+0.9
2,579,195	-		Synpcc7942_2498	0.58	+0.0
2,579,196	-		Synpcc7942_2498	0.58	-1.6
2,579,202	+		Synpcc7942_2498	0.59	-2.1
2,579,210	-		Synpcc7942_2498	0.59	+0.9
2,579,210	-		Synpcc7942_2498	0.59	+0.3
2,579,213	+		Synpcc7942_2498	0.60	+1.1
2,579,232	+		Synpcc7942_2498	0.61	+0.1
2,579,233	+		Synpcc7942_2498	0.61	+2.3
2,579,258	+		Synpcc7942_2498	0.63	-2.4
2,579,258	+		Synpcc7942_2498	0.63	+0.6
2,579,266	-		Synpcc7942_2498	0.64	-2.9
2,579,274	+		Synpcc7942_2498	0.64	-0.3
2,579,276	-		Synpcc7942_2498	0.65	+1.4
2,579,282	-		Synpcc7942_2498	0.65	+1.3
2,579,284	+		Synpcc7942_2498	0.65	+1.9
2,579,284	+		Synpcc7942_2498	0.65	-1.5
2,579,284	+		Synpcc7942_2498	0.65	+0.4
2,579,292	-		Synpcc7942_2498	0.66	-1.9
2,579,292	-		Synpcc7942_2498	0.66	+2.0
2,579,319	+		Synpcc7942_2498	0.68	+2.1
2,579,339	+		Synpcc7942_2498	0.70	+0.4
2,579,427	-		Synpcc7942_2498	0.77	+1.4
2,579,433	+		Synpcc7942_2498	0.77	-1.9
2,579,433	+		Synpcc7942_2498	0.77	-3.8
2,579,449	+		Synpcc7942_2498	0.79	+0.4
2,579,464	-		Synpcc7942_2498	0.80	+1.4
2,579,472	+		Synpcc7942_2498	0.80	+0.7
2,579,472	+		Synpcc7942_2498	0.80	-1.9
2,579,488	+		Synpcc7942_2498	0.82	-2.2
2,579,496	-		Synpcc7942_2498	0.82	+1.4
2,579,503	-		Synpcc7942_2498	0.83	-2.2
2,579,515	+		Synpcc7942_2498	0.84	+1.2
2,579,518	-		Synpcc7942_2498	0.84	+0.9
2,579,534	-		Synpcc7942_2498	0.85	-2.2
2,579,571	+		Synpcc7942_2498	0.88	+1.6
2,579,582	-		Synpcc7942_2498	0.89	+1.0
2,579,582	-		Synpcc7942_2498	0.89	+1.7
2,579,627	-				+1.0
2,579,632	+				+1.1
2,579,638	-				-2.5
2,579,638	-				+0.3
2,579,639	+				-0.3
2,579,644	+				-1.0
2,579,649	+				+1.5
2,579,649	+				-1.1
2,579,649	+				-1.1
2,579,649	+				-2.0
2,579,657	-				+0.9
2,579,657	-				-1.1
2,579,677	+				+2.9
2,579,685	-				+0.3
2,579,685	-				-3.5
2,579,713	+				+1.1
2,579,721	-				+1.9
2,579,754	-				-0.1
2,579,774	+				+1.2
2,579,774	+				-3.4
2,579,774	+				+0.1
2,579,777	-				+0.3
2,579,782	-				+0.6
2,579,782	-				-1.1
2,579,782	-				+0.1
2,579,793	-				-0.5
2,579,801	-				+0.2
2,579,829	+				-2.4
2,579,829	+				+1.3
2,579,829	+				-0.2
2,579,829	+				+1.3
2,579,829	+				+0.7
2,579,835	+				+0.6
2,579,835	+				-0.3
2,579,835	+				+0.9
2,579,835	+				-0.9
2,579,835	+				+1.4
2,579,837	-				+1.4
2,579,837	-				-1.1
2,579,837	-				+0.0
2,579,848	-				+1.5
2,579,861	+		Synpcc7942_2499	0.11	+0.4
2,579,885	-		Synpcc7942_2499	0.13	+0.3
2,579,924	+		Synpcc7942_2499	0.16	-0.3
2,579,935	-		Synpcc7942_2499	0.16	-0.4
2,579,962	+		Synpcc7942_2499	0.18	-0.6
2,579,994	-		Synpcc7942_2499	0.21	-4.7
2,580,055	+		Synpcc7942_2499	0.25	+1.8
2,580,055	+		Synpcc7942_2499	0.25	-2.3
2,580,074	-		Synpcc7942_2499	0.27	+0.7
2,580,074	-		Synpcc7942_2499	0.27	+0.7
2,580,074	-		Synpcc7942_2499	0.27	+1.2
2,580,081	-		Synpcc7942_2499	0.27	+0.6
2,580,082	+		Synpcc7942_2499	0.27	+0.3
2,580,082	+		Synpcc7942_2499	0.27	-0.3
2,580,090	-		Synpcc7942_2499	0.28	+0.9
2,580,146	+		Synpcc7942_2499	0.32	-2.0
2,580,187	-		Synpcc7942_2499	0.35	+0.9
2,580,192	-		Synpcc7942_2499	0.36	+1.8
2,580,212	-		Synpcc7942_2499	0.37	+1.7
2,580,247	-		Synpcc7942_2499	0.40	+0.8
2,580,271	+		Synpcc7942_2499	0.41	+0.3
2,580,286	+		Synpcc7942_2499	0.43	-0.8
2,580,294	-				-0.2
2,580,305	-		Synpcc7942_2499	0.44	-1.4
2,580,305	-		Synpcc7942_2499	0.44	-0.6
2,580,318	-		Synpcc7942_2499	0.45	+1.7
2,580,329	+		Synpcc7942_2499	0.46	-1.0
2,580,330	+		Synpcc7942_2499	0.46	+0.1
2,580,330	+		Synpcc7942_2499	0.46	-2.7
2,580,345	-		Synpcc7942_2499	0.47	+3.0
2,580,345	-		Synpcc7942_2499	0.47	-1.4
2,580,361	-		Synpcc7942_2499	0.48	+0.7
2,580,364	-		Synpcc7942_2499	0.48	+0.8
2,580,369	+		Synpcc7942_2499	0.49	+1.0
2,580,372	-		Synpcc7942_2499	0.49	+2.2
2,580,377	-		Synpcc7942_2499	0.49	-0.7
2,580,523	-		Synpcc7942_2499	0.60	-3.5
2,580,528	-		Synpcc7942_2499	0.61	+0.9
2,580,528	-		Synpcc7942_2499	0.61	-0.1
2,580,530	+		Synpcc7942_2499	0.61	+0.9
2,580,530	+		Synpcc7942_2499	0.61	+1.1
2,580,538	-		Synpcc7942_2499	0.61	+0.4
2,580,538	-		Synpcc7942_2499	0.61	+3.2
2,580,538	-		Synpcc7942_2499	0.61	-1.1
2,580,556	-		Synpcc7942_2499	0.63	-1.8
2,580,569	+		Synpcc7942_2499	0.64	+1.4
2,580,577	-		Synpcc7942_2499	0.64	+0.0
2,580,580	-		Synpcc7942_2499	0.65	-0.9
2,580,602	-		Synpcc7942_2499	0.66	-2.6
2,580,714	-		Synpcc7942_2499	0.74	-1.7
2,580,725	-		Synpcc7942_2499	0.75	+0.4
2,580,810	-		Synpcc7942_2499	0.82	+2.0
2,580,812	+		Synpcc7942_2499	0.82	-2.4
2,580,812	+		Synpcc7942_2499	0.82	-0.0
2,580,812	+		Synpcc7942_2499	0.82	+0.2
2,580,823	+		Synpcc7942_2499	0.83	-3.1
2,580,835	-		Synpcc7942_2499	0.84	+1.4
2,580,852	+		Synpcc7942_2499	0.85	+1.3
2,580,892	-		Synpcc7942_2499	0.88	+0.6
2,580,903	+		Synpcc7942_2499	0.89	-1.8
2,580,912	-		Synpcc7942_2499	0.89	+0.1
2,580,948	+				+1.1
2,580,956	-				+1.6
2,580,956	-				+1.1
2,581,006	+				+1.4
2,581,025	-				-1.3
2,581,036	-				+2.4
2,581,053	+				+1.2
2,581,053	+				-0.3
2,581,053	+				+1.4
2,581,088	+				-1.6
2,581,094	+				-3.7
2,581,094	+				-1.1
2,581,102	-				-1.8
2,581,125	+				-2.8
2,581,127	+				+3.2
2,581,137	+				+0.4
2,581,137	+				-0.6
2,581,145	-				-2.6
2,581,145	-				+0.4
2,581,145	-				+0.4
2,581,156	+				+0.8
2,581,167	-		Synpcc7942_2500	0.11	-2.0
2,581,194	-		Synpcc7942_2500	0.16	+2.5
2,581,228	+				+0.6
2,581,228	+		Synpcc7942_2500	0.21	-0.7
2,581,228	+		Synpcc7942_2500	0.21	+0.9
2,581,228	+		Synpcc7942_2500	0.21	+1.4
2,581,236	-		Synpcc7942_2500	0.23	-0.1
2,581,248	-		Synpcc7942_2500	0.24	-0.5
2,581,279	+		Synpcc7942_2500	0.29	-0.6
2,581,281	-		Synpcc7942_2500	0.30	+2.2
2,581,281	-		Synpcc7942_2500	0.30	-0.0
2,581,307	+		Synpcc7942_2500	0.34	-0.8
2,581,313	+		Synpcc7942_2500	0.35	+1.8
2,581,313	-		Synpcc7942_2500	0.35	+0.5
2,581,313	-		Synpcc7942_2500	0.35	+2.0
2,581,315	+		Synpcc7942_2500	0.35	-2.6
2,581,317	+		Synpcc7942_2500	0.36	+0.3
2,581,317	+		Synpcc7942_2500	0.36	+1.6
2,581,370	+		Synpcc7942_2500	0.44	-1.0
2,581,444	+		Synpcc7942_2500	0.56	+0.4
2,581,494	+		Synpcc7942_2500	0.64	+1.3
2,581,527	+		Synpcc7942_2500	0.69	+1.1
2,581,535	-		Synpcc7942_2500	0.71	+2.9
2,581,554	-		Synpcc7942_2500	0.74	-1.2
2,581,568	+		Synpcc7942_2500	0.76	+2.1
2,581,593	+		Synpcc7942_2500	0.80	+0.1
2,581,614	-		Synpcc7942_2500	0.83	+1.9
2,581,614	-		Synpcc7942_2500	0.83	-1.3
2,581,642	+		Synpcc7942_2500	0.88	-0.6
2,581,650	+				+1.0
2,581,699	+				-1.8
2,581,709	-				-0.2
2,581,742	+				-0.9
2,581,755	-				-0.9
2,581,756	+				-0.7
2,581,801	+				-3.3
2,581,803	+				+0.3
2,581,803	+				-1.1
2,581,811	-				+0.3
2,581,814	+				-0.8
2,581,816	-				-1.9
2,581,822	-				-1.9
2,581,822	-				+1.3
2,581,908	-				+0.8