Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2271

Experiment: Flask grown at 18C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Flask grown at 18C
2,338,072	+				-2.4
2,338,072	+				-0.0
2,338,072	+				-2.3
2,338,085	+		Synpcc7942_2270	0.11	-1.9
2,338,122	-		Synpcc7942_2270	0.14	-0.3
2,338,132	-		Synpcc7942_2270	0.15	-0.5
2,338,185	+		Synpcc7942_2270	0.20	-2.4
2,338,206	-		Synpcc7942_2270	0.23	-2.0
2,338,218	+		Synpcc7942_2270	0.24	-0.2
2,338,218	+		Synpcc7942_2270	0.24	-3.2
2,338,227	+		Synpcc7942_2270	0.25	-2.5
2,338,237	-				+0.4
2,338,260	-		Synpcc7942_2270	0.28	-1.9
2,338,331	+		Synpcc7942_2270	0.35	-0.9
2,338,333	+		Synpcc7942_2270	0.35	-3.0
2,338,337	-		Synpcc7942_2270	0.35	-2.2
2,338,339	-		Synpcc7942_2270	0.35	-0.8
2,338,339	-		Synpcc7942_2270	0.35	-0.9
2,338,350	-		Synpcc7942_2270	0.36	+0.6
2,338,365	-		Synpcc7942_2270	0.38	-3.0
2,338,391	+		Synpcc7942_2270	0.40	-0.4
2,338,391	+		Synpcc7942_2270	0.40	+0.3
2,338,391	+		Synpcc7942_2270	0.40	-1.6
2,338,391	+		Synpcc7942_2270	0.40	-1.4
2,338,391	-		Synpcc7942_2270	0.40	+0.4
2,338,399	-		Synpcc7942_2270	0.41	-0.8
2,338,399	-		Synpcc7942_2270	0.41	-2.2
2,338,399	-		Synpcc7942_2270	0.41	-1.6
2,338,403	+		Synpcc7942_2270	0.42	-0.5
2,338,403	+		Synpcc7942_2270	0.42	-0.6
2,338,411	-		Synpcc7942_2270	0.42	-2.8
2,338,411	-		Synpcc7942_2270	0.42	-0.3
2,338,426	-		Synpcc7942_2270	0.44	+1.8
2,338,453	+		Synpcc7942_2270	0.46	-2.4
2,338,466	-		Synpcc7942_2270	0.48	-2.0
2,338,474	+		Synpcc7942_2270	0.48	-1.6
2,338,474	+		Synpcc7942_2270	0.48	+0.7
2,338,474	+		Synpcc7942_2270	0.48	-0.2
2,338,479	+		Synpcc7942_2270	0.49	+1.0
2,338,482	-		Synpcc7942_2270	0.49	-0.6
2,338,482	-		Synpcc7942_2270	0.49	-0.7
2,338,526	+		Synpcc7942_2270	0.53	+0.3
2,338,526	+		Synpcc7942_2270	0.53	+0.4
2,338,534	-		Synpcc7942_2270	0.54	+0.1
2,338,563	-		Synpcc7942_2270	0.57	+0.1
2,338,586	+		Synpcc7942_2270	0.59	-1.1
2,338,664	-		Synpcc7942_2270	0.67	-0.6
2,338,664	-		Synpcc7942_2270	0.67	-0.8
2,338,691	+		Synpcc7942_2270	0.69	-4.3
2,338,707	-		Synpcc7942_2270	0.71	-1.4
2,338,718	-		Synpcc7942_2270	0.72	-2.2
2,338,739	-		Synpcc7942_2270	0.74	-1.4
2,338,741	+		Synpcc7942_2270	0.74	-0.5
2,338,748	+		Synpcc7942_2270	0.75	-0.4
2,338,754	+		Synpcc7942_2270	0.75	-1.4
2,338,758	+		Synpcc7942_2270	0.76	-2.7
2,338,806	-		Synpcc7942_2270	0.80	-2.4
2,338,807	+		Synpcc7942_2270	0.81	-0.9
2,338,838	-		Synpcc7942_2270	0.84	-1.0
2,338,844	+		Synpcc7942_2270	0.84	-0.2
2,338,844	+		Synpcc7942_2270	0.84	-1.2
2,338,844	+		Synpcc7942_2270	0.84	-0.5
2,338,865	-				+0.4
2,338,881	+		Synpcc7942_2270	0.88	-2.5
2,338,881	+		Synpcc7942_2270	0.88	-3.0
2,338,881	+		Synpcc7942_2270	0.88	-1.9
2,338,884	-		Synpcc7942_2270	0.88	+0.6
2,338,889	+		Synpcc7942_2270	0.89	-3.8
2,338,889	-		Synpcc7942_2270	0.89	-3.4
2,338,889	-		Synpcc7942_2270	0.89	-0.9
2,338,889	-		Synpcc7942_2270	0.89	-0.4
2,338,894	-		Synpcc7942_2270	0.89	-0.8
2,338,894	-		Synpcc7942_2270	0.89	-2.1
2,338,899	-		Synpcc7942_2270	0.89	-1.6
2,338,899	-		Synpcc7942_2270	0.89	-2.0
2,338,922	-				-4.3
2,338,941	+				-1.2
2,338,941	+				-1.0
2,338,941	+				-1.5
2,338,941	+				-0.7
2,338,946	+				-1.9
2,338,949	-				-2.7
2,339,026	+				-3.1
2,339,027	-				-2.9
2,339,034	-				-3.3
2,339,061	-				-1.9
2,339,068	-				+0.2
2,339,113	-		Synpcc7942_2271	0.12	-1.1
2,339,146	-		Synpcc7942_2271	0.18	+1.7
2,339,146	-		Synpcc7942_2271	0.18	+0.4
2,339,148	-		Synpcc7942_2271	0.19	+1.4
2,339,169	-				+0.9
2,339,205	-		Synpcc7942_2271	0.29	+1.7
2,339,207	+		Synpcc7942_2271	0.29	+0.7
2,339,250	-		Synpcc7942_2271	0.37	+0.3
2,339,250	-		Synpcc7942_2271	0.37	+0.1
2,339,251	+		Synpcc7942_2271	0.37	-1.8
2,339,279	+		Synpcc7942_2271	0.42	-0.1
2,339,287	-		Synpcc7942_2271	0.44	+0.1
2,339,362	-		Synpcc7942_2271	0.57	+0.8
2,339,433	-		Synpcc7942_2271	0.70	+0.2
2,339,453	+		Synpcc7942_2271	0.74	-1.5
2,339,461	-		Synpcc7942_2271	0.75	-1.0
2,339,524	-		Synpcc7942_2271	0.87	-3.0
2,339,550	+				-2.1
2,339,556	+				-2.3
2,339,594	-				-3.5
2,339,594	-				-2.1
2,339,602	+				-3.1
2,339,611	-				+1.7
2,339,629	-				+2.7
2,340,138	+				+0.2
2,340,153	+				-0.8
2,340,181	+				-1.9
2,340,213	-				-1.8
2,340,229	+				-2.9
2,340,229	+				-0.6
2,340,250	+		Synpcc7942_2273	0.13	-1.5
2,340,258	-		Synpcc7942_2273	0.14	+0.2
2,340,258	-		Synpcc7942_2273	0.14	+1.6
2,340,262	+		Synpcc7942_2273	0.14	-0.8
2,340,262	+		Synpcc7942_2273	0.14	+0.3
2,340,270	-		Synpcc7942_2273	0.15	-2.0
2,340,272	+		Synpcc7942_2273	0.15	-1.2
2,340,273	+		Synpcc7942_2273	0.16	-1.8
2,340,278	+		Synpcc7942_2273	0.16	-1.2
2,340,287	-		Synpcc7942_2273	0.17	-0.8
2,340,317	+		Synpcc7942_2273	0.21	-0.3
2,340,318	+		Synpcc7942_2273	0.21	-1.3
2,340,326	-		Synpcc7942_2273	0.23	-2.2
2,340,337	+		Synpcc7942_2273	0.24	-4.8
2,340,341	+		Synpcc7942_2273	0.24	-0.1
2,340,397	+		Synpcc7942_2273	0.32	-2.9
2,340,416	+		Synpcc7942_2273	0.34	-1.7
2,340,424	-		Synpcc7942_2273	0.35	-0.9
2,340,473	-		Synpcc7942_2273	0.42	-0.5
2,340,473	-				-1.3
2,340,481	-		Synpcc7942_2273	0.43	-2.2
2,340,489	+		Synpcc7942_2273	0.44	-0.6
2,340,499	+		Synpcc7942_2273	0.45	-0.7
2,340,504	+		Synpcc7942_2273	0.46	-1.5
2,340,543	+		Synpcc7942_2273	0.51	-2.4
2,340,543	+		Synpcc7942_2273	0.51	-2.9
2,340,543	+		Synpcc7942_2273	0.51	-1.7
2,340,551	-		Synpcc7942_2273	0.52	-1.0
2,340,551	-		Synpcc7942_2273	0.52	-0.4
2,340,551	-		Synpcc7942_2273	0.52	-1.1
2,340,551	-		Synpcc7942_2273	0.52	-1.6
2,340,552	+		Synpcc7942_2273	0.52	-1.4
2,340,558	-		Synpcc7942_2273	0.53	-0.6
2,340,591	+		Synpcc7942_2273	0.57	-0.4