Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4704

Experiment: Carnitine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carnitine Hydrochloride (C)
5,435,201	-		Pf6N2E2_4702	0.64	-2.0
5,435,290	-		Pf6N2E2_4702	0.69	-2.9
5,435,290	-		Pf6N2E2_4702	0.69	-4.7
5,435,432	+		Pf6N2E2_4702	0.76	-3.8
5,435,432	+		Pf6N2E2_4702	0.76	-3.2
5,435,561	+		Pf6N2E2_4702	0.82	-4.7
5,435,561	+		Pf6N2E2_4702	0.82	-2.5
5,435,561	+		Pf6N2E2_4702	0.82	-4.6
5,435,561	+		Pf6N2E2_4702	0.82	-3.8
5,435,561	+		Pf6N2E2_4702	0.82	-3.1
5,435,562	-		Pf6N2E2_4702	0.82	-1.5
5,435,562	-		Pf6N2E2_4702	0.82	-2.7
5,435,576	+		Pf6N2E2_4702	0.83	-4.4
5,435,576	+		Pf6N2E2_4702	0.83	-3.7
5,435,577	-		Pf6N2E2_4702	0.83	-4.7
5,435,577	-		Pf6N2E2_4702	0.83	-2.0
5,435,624	+		Pf6N2E2_4702	0.85	-3.3
5,435,625	-		Pf6N2E2_4702	0.85	-4.2
5,435,625	-		Pf6N2E2_4702	0.85	-1.2
5,435,666	+		Pf6N2E2_4702	0.87	-4.0
5,435,666	+		Pf6N2E2_4702	0.87	-3.8
5,435,666	+		Pf6N2E2_4702	0.87	-4.2
5,435,666	+		Pf6N2E2_4702	0.87	-4.7
5,435,742	-				-1.3
5,435,744	+				-4.3
5,435,745	-				-4.0
5,435,881	+				-4.3
5,435,881	+				-3.3
5,435,882	-				-2.0
5,435,882	-				-2.6
5,435,882	-				-3.2
5,435,882	-				-2.6
5,435,882	-				-1.9
5,435,882	-				-0.2
5,435,882	-				-4.1
5,435,884	+				-4.2
5,435,885	-				-3.7
5,435,900	+				-4.2
5,435,901	-				-0.0
5,435,901	-				-1.6
5,435,947	+				+0.4
5,435,947	+				+0.1
5,435,948	-				-1.5
5,435,948	-				-3.0
5,435,948	-				-3.1
5,435,948	-				-2.2
5,436,083	+		Pf6N2E2_4703	0.74	+1.2
5,436,083	+		Pf6N2E2_4703	0.74	-0.2
5,436,083	+		Pf6N2E2_4703	0.74	+1.2
5,436,083	+		Pf6N2E2_4703	0.74	-0.6
5,436,083	+		Pf6N2E2_4703	0.74	+0.6
5,436,083	+		Pf6N2E2_4703	0.74	+1.0
5,436,083	+		Pf6N2E2_4703	0.74	-0.2
5,436,084	-		Pf6N2E2_4703	0.75	-1.8
5,436,084	-		Pf6N2E2_4703	0.75	-3.9
5,436,084	-		Pf6N2E2_4703	0.75	-1.3
5,436,084	-		Pf6N2E2_4703	0.75	-4.4
5,436,084	-		Pf6N2E2_4703	0.75	-3.5
5,436,139	+				-3.6
5,436,139	+				-3.2
5,436,139	+				-3.0
5,436,139	+				+0.7
5,436,140	-				-3.5
5,436,140	-				-2.2
5,436,140	-				-4.0
5,436,140	-				-3.7
5,436,140	-				-3.8
5,436,140	-				-3.3
5,436,161	-				-5.0
5,436,217	+				-3.9
5,436,217	+				-5.2
5,436,217	+				-2.4
5,436,217	+				-4.6
5,436,217	+				-2.5
5,436,217	+				-3.8
5,436,218	-				-3.2
5,436,218	-				-2.9
5,436,218	-				-3.4
5,436,218	-				+1.4
5,436,218	-				-3.7
5,436,218	-				-2.9
5,436,218	-				-3.5
5,436,218	-				-4.5
5,436,218	-				-3.9
5,436,284	+				-4.4
5,436,284	+				-2.0
5,436,284	+				-3.8
5,436,284	+				-2.8
5,436,284	+				-1.7
5,436,284	+				-5.1
5,436,284	+				-3.7
5,436,285	-				-3.6
5,436,323	+				-3.2
5,436,323	+				-4.0
5,436,323	+				-5.2
5,436,323	+				-2.2
5,436,323	+				-2.3
5,436,323	+				-3.8
5,436,324	-				-4.4
5,436,324	-				-3.8
5,436,324	-				-4.7
5,436,324	-				-2.6
5,436,324	-				-2.7
5,436,324	-				-4.6
5,436,324	-				-3.5
5,436,476	+		Pf6N2E2_4704	0.17	-4.0
5,436,477	-		Pf6N2E2_4704	0.17	-4.4
5,436,477	-		Pf6N2E2_4704	0.17	-3.5
5,437,535	+		Pf6N2E2_4704	0.72	-2.8
5,437,535	+		Pf6N2E2_4704	0.72	-3.7
5,437,535	+		Pf6N2E2_4704	0.72	-3.2
5,437,535	+		Pf6N2E2_4704	0.72	-4.5
5,437,535	+		Pf6N2E2_4704	0.72	-3.8
5,437,535	+		Pf6N2E2_4704	0.72	-4.2
5,437,535	+		Pf6N2E2_4704	0.72	-2.7
5,437,536	-		Pf6N2E2_4704	0.72	-2.2
5,437,581	+		Pf6N2E2_4704	0.74	-2.5
5,437,581	+		Pf6N2E2_4704	0.74	-3.8
5,437,595	+		Pf6N2E2_4704	0.75	-5.1
5,437,616	+		Pf6N2E2_4704	0.76	-3.4
5,437,616	+		Pf6N2E2_4704	0.76	-1.9
5,437,616	+		Pf6N2E2_4704	0.76	-4.3
5,437,617	-		Pf6N2E2_4704	0.76	-3.7
5,437,640	+		Pf6N2E2_4704	0.77	-3.7
5,437,640	+		Pf6N2E2_4704	0.77	-4.0
5,437,640	+		Pf6N2E2_4704	0.77	-3.0
5,437,640	+		Pf6N2E2_4704	0.77	-2.3
5,437,640	+		Pf6N2E2_4704	0.77	-3.3
5,437,640	+		Pf6N2E2_4704	0.77	-4.3
5,437,640	+		Pf6N2E2_4704	0.77	-4.5
5,437,640	+		Pf6N2E2_4704	0.77	-3.8
5,437,640	+		Pf6N2E2_4704	0.77	-2.5
5,437,640	+		Pf6N2E2_4704	0.77	-3.5
5,437,640	+		Pf6N2E2_4704	0.77	-2.6
5,437,640	+		Pf6N2E2_4704	0.77	-3.4
5,437,640	+		Pf6N2E2_4704	0.77	-4.6
5,437,640	+		Pf6N2E2_4704	0.77	-2.4
5,437,640	+		Pf6N2E2_4704	0.77	-3.8
5,437,640	+		Pf6N2E2_4704	0.77	-3.4
5,437,640	+		Pf6N2E2_4704	0.77	-1.5
5,437,640	+		Pf6N2E2_4704	0.77	-3.4
5,437,641	-		Pf6N2E2_4704	0.77	-4.2
5,437,641	-		Pf6N2E2_4704	0.77	-4.6
5,437,641	-		Pf6N2E2_4704	0.77	-4.2
5,437,641	-		Pf6N2E2_4704	0.77	-4.7
5,437,641	-		Pf6N2E2_4704	0.77	-4.5
5,437,641	-		Pf6N2E2_4704	0.77	-3.7
5,437,641	-		Pf6N2E2_4704	0.77	-4.2
5,437,641	-		Pf6N2E2_4704	0.77	-4.1
5,437,641	-		Pf6N2E2_4704	0.77	-2.0
5,437,641	-		Pf6N2E2_4704	0.77	-4.6
5,437,641	-		Pf6N2E2_4704	0.77	-2.0
5,437,641	-		Pf6N2E2_4704	0.77	-3.1
5,437,641	-		Pf6N2E2_4704	0.77	-0.6
5,437,641	-		Pf6N2E2_4704	0.77	-1.3
5,437,641	-		Pf6N2E2_4704	0.77	-3.3
5,437,641	-		Pf6N2E2_4704	0.77	-3.7
5,437,641	-		Pf6N2E2_4704	0.77	-0.2
5,437,643	-		Pf6N2E2_4704	0.77	-4.9
5,437,643	-		Pf6N2E2_4704	0.77	-3.1
5,437,721	+		Pf6N2E2_4704	0.81	-3.4
5,437,734	-		Pf6N2E2_4704	0.82	-1.9
5,437,734	-		Pf6N2E2_4704	0.82	-4.3
5,437,745	+		Pf6N2E2_4704	0.82	-4.8
5,437,746	-		Pf6N2E2_4704	0.82	-3.8
5,438,087	+				-3.8
5,438,301	+		Pf6N2E2_4705	0.17	-3.0
5,438,302	-		Pf6N2E2_4705	0.17	-4.0
5,438,356	+		Pf6N2E2_4705	0.22	-3.2
5,438,356	+		Pf6N2E2_4705	0.22	-3.0
5,438,356	+		Pf6N2E2_4705	0.22	-3.8
5,438,357	-		Pf6N2E2_4705	0.22	-0.5
5,438,357	-		Pf6N2E2_4705	0.22	-3.8
5,438,357	-		Pf6N2E2_4705	0.22	-2.6
5,438,357	-		Pf6N2E2_4705	0.22	-3.2
5,438,442	+		Pf6N2E2_4705	0.29	-3.2
5,438,846	+		Pf6N2E2_4705	0.62	-1.5