Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS16765

Experiment: R2A with Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.003 mg/ml
4,204,849	-		CA265_RS16755	0.86	-0.0
4,204,849	-		CA265_RS16755	0.86	+0.1
4,204,849	-		CA265_RS16755	0.86	+0.9
4,204,883	+				+0.1
4,204,890	+				+0.9
4,204,969	-				+0.1
4,205,056	+				+0.9
4,205,057	-				+0.8
4,205,099	-		CA265_RS16760	0.12	+0.1
4,205,108	+		CA265_RS16760	0.14	-1.3
4,205,178	-		CA265_RS16760	0.26	+0.1
4,205,276	+		CA265_RS16760	0.43	+0.7
4,205,277	-		CA265_RS16760	0.43	-0.4
4,205,340	+		CA265_RS16760	0.54	+0.3
4,205,361	+		CA265_RS16760	0.58	-0.4
4,205,361	+		CA265_RS16760	0.58	-0.9
4,205,363	+		CA265_RS16760	0.58	+0.7
4,205,363	+		CA265_RS16760	0.58	-1.6
4,205,390	+		CA265_RS16760	0.63	+0.9
4,205,398	-		CA265_RS16760	0.64	+0.5
4,205,446	+		CA265_RS16760	0.73	-0.3
4,205,455	-		CA265_RS16760	0.74	-0.7
4,205,595	+				+1.2
4,205,659	+				+0.1
4,205,719	+				-0.5
4,205,722	+				+1.0
4,205,722	+				-0.2
4,205,723	-				-3.2
4,205,723	-				+0.6
4,205,726	+				-0.4
4,205,726	+				-0.2
4,205,764	+				-0.8
4,205,773	-				-1.5
4,205,824	+				-0.7
4,205,824	+				+0.2
4,205,864	+				-0.8
4,205,909	-		CA265_RS16765	0.12	-0.6
4,205,962	-		CA265_RS16765	0.16	-1.2
4,206,027	+		CA265_RS16765	0.22	+1.3
4,206,028	-		CA265_RS16765	0.22	-1.4
4,206,134	-		CA265_RS16765	0.31	-0.6
4,206,134	-		CA265_RS16765	0.31	+0.7
4,206,197	+		CA265_RS16765	0.36	-0.0
4,206,198	-		CA265_RS16765	0.36	+0.9
4,206,293	-		CA265_RS16765	0.44	-0.7
4,206,375	+		CA265_RS16765	0.51	+1.0
4,206,376	-		CA265_RS16765	0.51	-0.2
4,206,410	-		CA265_RS16765	0.54	+0.2
4,206,416	-		CA265_RS16765	0.54	-0.8
4,206,416	-		CA265_RS16765	0.54	+0.9
4,206,438	-		CA265_RS16765	0.56	-0.4
4,206,459	+		CA265_RS16765	0.58	-0.5
4,206,460	-		CA265_RS16765	0.58	-0.4
4,206,460	-		CA265_RS16765	0.58	-0.1
4,206,506	-		CA265_RS16765	0.62	+0.2
4,206,512	+		CA265_RS16765	0.62	+1.7
4,206,536	+		CA265_RS16765	0.64	-2.8
4,206,569	+		CA265_RS16765	0.67	+2.5
4,206,570	-		CA265_RS16765	0.67	-2.0
4,206,728	+		CA265_RS16765	0.81	+0.8
4,206,790	+		CA265_RS16765	0.86	-0.6
4,206,790	+		CA265_RS16765	0.86	-0.2
4,206,798	-		CA265_RS16765	0.86	-1.1
4,206,815	-		CA265_RS16765	0.88	+0.5
4,206,942	+				-1.8
4,206,977	+				+0.6
4,207,018	-				-0.6
4,207,034	+				-0.6
4,207,035	-				+1.8
4,207,035	-				-0.6
4,207,151	+				-2.1
4,207,155	-				-0.9
4,207,155	-				+0.3
4,207,291	+				-0.2
4,207,292	-				+0.4
4,207,329	-				-0.6
4,207,511	+		CA265_RS16770	0.15	+0.5
4,207,512	-		CA265_RS16770	0.15	+0.2
4,207,514	-		CA265_RS16770	0.16	-0.7
4,207,514	-		CA265_RS16770	0.16	-0.6
4,207,658	+		CA265_RS16770	0.24	-0.2
4,207,658	+		CA265_RS16770	0.24	-0.3
4,207,659	-		CA265_RS16770	0.24	-0.5
4,207,668	+		CA265_RS16770	0.24	+1.3
4,207,668	+		CA265_RS16770	0.24	+0.3
4,207,850	-		CA265_RS16770	0.35	-0.4
4,207,868	-		CA265_RS16770	0.36	+0.3