Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05270

Experiment: R2A with Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Fusidic 0.003 mg/ml
1,259,110	+		CA265_RS05265	0.30	+0.4
1,259,114	-		CA265_RS05265	0.31	-0.4
1,259,116	-		CA265_RS05265	0.31	-0.3
1,259,125	+		CA265_RS05265	0.32	+0.1
1,259,145	+		CA265_RS05265	0.33	-0.4
1,259,174	-		CA265_RS05265	0.36	-0.3
1,259,229	-		CA265_RS05265	0.41	+0.0
1,259,240	+		CA265_RS05265	0.42	-0.6
1,259,240	+		CA265_RS05265	0.42	-0.5
1,259,246	-		CA265_RS05265	0.43	+0.4
1,259,272	+		CA265_RS05265	0.45	-1.3
1,259,273	-		CA265_RS05265	0.45	+0.8
1,259,291	-		CA265_RS05265	0.47	-0.1
1,259,294	+		CA265_RS05265	0.47	-1.4
1,259,294	+		CA265_RS05265	0.47	-0.3
1,259,294	+		CA265_RS05265	0.47	-0.6
1,259,303	+		CA265_RS05265	0.48	+1.6
1,259,330	+		CA265_RS05265	0.50	-0.0
1,259,330	+		CA265_RS05265	0.50	+0.1
1,259,426	+		CA265_RS05265	0.59	+0.4
1,259,470	+		CA265_RS05265	0.63	-0.3
1,259,495	-		CA265_RS05265	0.65	-0.3
1,259,502	+		CA265_RS05265	0.66	-1.2
1,259,504	+		CA265_RS05265	0.66	+0.2
1,259,539	+		CA265_RS05265	0.69	-0.2
1,259,540	-		CA265_RS05265	0.69	+0.7
1,259,605	+		CA265_RS05265	0.75	+2.9
1,259,614	+		CA265_RS05265	0.76	+0.4
1,259,671	-		CA265_RS05265	0.81	-0.2
1,259,699	-		CA265_RS05265	0.84	+0.7
1,259,710	+		CA265_RS05265	0.85	+0.5
1,259,754	+		CA265_RS05265	0.89	-0.1
1,259,754	+		CA265_RS05265	0.89	+1.2
1,259,758	-		CA265_RS05265	0.89	+0.2
1,259,762	+		CA265_RS05265	0.90	+1.4
1,259,763	-		CA265_RS05265	0.90	+1.0
1,259,776	+				-0.7
1,259,777	-				-1.6
1,259,885	+				+0.4
1,259,886	-				-1.5
1,259,886	-				+0.8
1,259,909	+				+0.8
1,259,910	-				-0.1
1,259,910	-				+0.3
1,259,932	-				-0.6
1,259,952	-				-0.2
1,259,975	+				+1.4
1,259,976	-				-0.3
1,259,984	-				+0.1
1,259,997	-				-0.3
1,260,031	-				-0.1
1,260,051	+				-0.2
1,260,051	+				+0.4
1,260,052	-				+1.1
1,260,063	+				+0.3
1,260,063	+				+0.1
1,260,072	+				+1.2
1,260,072	+				+0.5
1,260,073	-				-0.2
1,260,092	+				+0.3
1,260,202	-		CA265_RS05270	0.16	-0.4
1,260,216	-		CA265_RS05270	0.18	-2.0
1,260,270	-		CA265_RS05270	0.25	+3.5
1,260,283	-		CA265_RS05270	0.26	-0.0
1,260,283	-		CA265_RS05270	0.26	+0.1
1,260,310	-		CA265_RS05270	0.30	+0.8
1,260,315	-		CA265_RS05270	0.30	+1.1
1,260,423	-		CA265_RS05270	0.44	-0.3
1,260,423	-		CA265_RS05270	0.44	+0.6
1,260,424	+		CA265_RS05270	0.44	+2.0
1,260,426	+		CA265_RS05270	0.44	+1.3
1,260,427	-		CA265_RS05270	0.45	-1.0
1,260,427	-		CA265_RS05270	0.45	-0.4
1,260,459	+		CA265_RS05270	0.49	-0.9
1,260,480	-		CA265_RS05270	0.51	-2.2
1,260,587	+		CA265_RS05270	0.65	-0.8
1,260,587	+		CA265_RS05270	0.65	+0.7
1,260,633	+		CA265_RS05270	0.70	+0.4
1,260,752	+		CA265_RS05270	0.85	-0.6
1,260,752	+		CA265_RS05270	0.85	+0.4
1,260,752	+		CA265_RS05270	0.85	+0.3
1,260,753	-		CA265_RS05270	0.86	+0.8
1,260,785	+		CA265_RS05270	0.90	+0.1
1,260,841	-				+1.1
1,260,847	+				-0.5
1,260,911	-				+0.1
1,260,964	-		CA265_RS05275	0.17	-0.2
1,260,990	+		CA265_RS05275	0.26	-0.0
1,260,991	-		CA265_RS05275	0.27	-0.6
1,261,122	+		CA265_RS05275	0.71	-0.2
1,261,125	+		CA265_RS05275	0.72	-0.2
1,261,213	-				-1.0
1,261,222	-				-1.1
1,261,259	-				-0.9
1,261,348	+				+0.8
1,261,391	-				-0.4
1,261,399	+				+0.0
1,261,419	+				-0.3
1,261,452	-				+0.2
1,261,484	+				+0.1
1,261,485	-				-0.0
1,261,491	-				+0.1
1,261,505	+				-0.1
1,261,506	-				+0.1
1,261,621	+				+0.4
1,261,624	+				+0.0
1,261,624	+				+0.2
1,261,643	+				-0.6
1,261,650	+				+0.4
1,261,683	-				+0.6
1,261,700	+				+0.1
1,261,709	+				-0.3
1,261,771	+				-0.9
1,261,772	-				-0.2
1,261,772	-				-2.3
1,261,815	+				-0.9