Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_501 and Ac3H11_502 are separated by 15 nucleotides Ac3H11_502 and Ac3H11_503 overlap by 4 nucleotides Ac3H11_503 and Ac3H11_504 are separated by 66 nucleotides
Ac3H11_501 - ABC-type multidrug transport system, permease component, at 196,426 to 197,634
_501
Ac3H11_502 - Membrane-fusion protein, at 197,650 to 198,633
_502
Ac3H11_503 - Outer membrane protein assembly factor YaeT precursor, at 198,630 to 200,024
_503
Ac3H11_504 - FIG00348850: hypothetical protein, at 200,091 to 200,912
_504
Position (kb) 198
199
200
201 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 197.795 kb on + strand, within Ac3H11_502 at 197.795 kb on + strand, within Ac3H11_502 at 197.796 kb on - strand, within Ac3H11_502 at 197.796 kb on - strand, within Ac3H11_502 at 198.122 kb on + strand, within Ac3H11_502 at 198.122 kb on + strand, within Ac3H11_502 at 198.122 kb on + strand, within Ac3H11_502 at 198.122 kb on + strand, within Ac3H11_502 at 198.123 kb on - strand, within Ac3H11_502 at 198.664 kb on + strand at 198.664 kb on + strand at 198.664 kb on + strand at 198.664 kb on + strand at 198.664 kb on + strand at 198.664 kb on + strand at 198.664 kb on + strand at 198.665 kb on - strand at 198.665 kb on - strand at 198.665 kb on - strand at 198.665 kb on - strand at 198.665 kb on - strand at 198.665 kb on - strand at 198.724 kb on + strand at 198.724 kb on + strand at 198.725 kb on - strand at 198.725 kb on - strand at 198.880 kb on + strand, within Ac3H11_503 at 198.881 kb on - strand, within Ac3H11_503 at 199.507 kb on + strand, within Ac3H11_503 at 199.507 kb on + strand, within Ac3H11_503 at 199.529 kb on + strand, within Ac3H11_503 at 199.530 kb on - strand, within Ac3H11_503 at 199.530 kb on - strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.621 kb on + strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.622 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.682 kb on - strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.701 kb on + strand, within Ac3H11_503 at 199.702 kb on - strand, within Ac3H11_503 at 199.702 kb on - strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.801 kb on + strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.802 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 199.808 kb on - strand, within Ac3H11_503 at 200.113 kb on + strand at 200.113 kb on + strand at 200.113 kb on + strand at 200.114 kb on - strand at 200.114 kb on - strand at 200.191 kb on + strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.192 kb on - strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.398 kb on + strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.399 kb on - strand, within Ac3H11_504 at 200.952 kb on + strand at 200.952 kb on + strand at 200.953 kb on - strand at 200.953 kb on - strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.976 kb on + strand at 200.977 kb on - strand at 200.998 kb on - strand at 201.007 kb on + strand at 201.007 kb on + strand at 201.008 kb on - strand at 201.011 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 197,795 + Ac3H11_502 0.15 -0.5 197,795 + Ac3H11_502 0.15 -1.0 197,796 - Ac3H11_502 0.15 +1.9 197,796 - Ac3H11_502 0.15 -0.7 198,122 + Ac3H11_502 0.48 -2.2 198,122 + Ac3H11_502 0.48 -0.2 198,122 + Ac3H11_502 0.48 -0.3 198,122 + Ac3H11_502 0.48 +0.9 198,123 - Ac3H11_502 0.48 -0.9 198,664 + -0.1 198,664 + +1.2 198,664 + -1.4 198,664 + +0.5 198,664 + -0.3 198,664 + -0.8 198,664 + -1.1 198,665 - +1.8 198,665 - -1.6 198,665 - -0.7 198,665 - -2.8 198,665 - +0.4 198,665 - +2.0 198,724 + +0.9 198,724 + -0.1 198,725 - -2.4 198,725 - +1.3 198,880 + Ac3H11_503 0.18 -1.7 198,881 - Ac3H11_503 0.18 -1.3 199,507 + Ac3H11_503 0.63 -0.6 199,507 + Ac3H11_503 0.63 -2.4 199,529 + Ac3H11_503 0.64 -2.0 199,530 - Ac3H11_503 0.65 -0.4 199,530 - Ac3H11_503 0.65 -0.2 199,621 + Ac3H11_503 0.71 -1.5 199,621 + Ac3H11_503 0.71 -2.4 199,621 + Ac3H11_503 0.71 -1.5 199,621 + Ac3H11_503 0.71 +0.3 199,622 - Ac3H11_503 0.71 -1.0 199,622 - Ac3H11_503 0.71 +1.6 199,622 - Ac3H11_503 0.71 -2.9 199,622 - Ac3H11_503 0.71 +0.3 199,622 - Ac3H11_503 0.71 -0.3 199,622 - Ac3H11_503 0.71 -1.8 199,622 - Ac3H11_503 0.71 +0.4 199,622 - Ac3H11_503 0.71 -1.4 199,682 - Ac3H11_503 0.75 +0.0 199,682 - Ac3H11_503 0.75 -2.3 199,682 - Ac3H11_503 0.75 +0.2 199,682 - Ac3H11_503 0.75 +1.1 199,701 + Ac3H11_503 0.77 +0.0 199,701 + Ac3H11_503 0.77 -3.0 199,701 + Ac3H11_503 0.77 +0.3 199,701 + Ac3H11_503 0.77 -0.2 199,702 - Ac3H11_503 0.77 +3.2 199,702 - Ac3H11_503 0.77 +0.9 199,801 + Ac3H11_503 0.84 -0.2 199,801 + Ac3H11_503 0.84 -0.4 199,801 + Ac3H11_503 0.84 +1.9 199,801 + Ac3H11_503 0.84 +0.6 199,802 - Ac3H11_503 0.84 -0.2 199,802 - Ac3H11_503 0.84 +0.9 199,802 - Ac3H11_503 0.84 -3.7 199,802 - Ac3H11_503 0.84 +1.8 199,802 - Ac3H11_503 0.84 -2.7 199,802 - Ac3H11_503 0.84 +0.3 199,802 - Ac3H11_503 0.84 +1.4 199,802 - Ac3H11_503 0.84 +1.2 199,802 - Ac3H11_503 0.84 +0.3 199,802 - Ac3H11_503 0.84 +1.0 199,808 - Ac3H11_503 0.84 -1.9 199,808 - Ac3H11_503 0.84 +1.3 199,808 - Ac3H11_503 0.84 -1.3 200,113 + +2.0 200,113 + -0.7 200,113 + -1.1 200,114 - -1.8 200,114 - -0.0 200,191 + Ac3H11_504 0.12 -3.4 200,192 - Ac3H11_504 0.12 +0.9 200,192 - Ac3H11_504 0.12 +1.6 200,398 + Ac3H11_504 0.37 -0.7 200,398 + Ac3H11_504 0.37 +0.0 200,398 + Ac3H11_504 0.37 +3.3 200,399 - Ac3H11_504 0.37 -0.9 200,399 - Ac3H11_504 0.37 +1.1 200,952 + +1.0 200,952 + +1.5 200,953 - -0.1 200,953 - +0.0 200,976 + +0.6 200,976 + -0.2 200,976 + -2.2 200,976 + -0.4 200,976 + +0.8 200,976 + -1.2 200,977 - -1.7 200,998 - -1.4 201,007 + -1.4 201,007 + -0.5 201,008 - +1.0 201,011 + +0.9
Or see this region's nucleotide sequence