Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4915 and Ac3H11_4916 are separated by 79 nucleotides Ac3H11_4916 and Ac3H11_4917 overlap by 4 nucleotides Ac3H11_4917 and Ac3H11_4918 are separated by 155 nucleotides
Ac3H11_4915 - (AF179595) Vco33, at 78,696 to 79,040
_4915
Ac3H11_4916 - Transcriptional regulator, ArsR family, at 79,120 to 79,866
_4916
Ac3H11_4917 - Protein of unknown function UPF0060, at 79,863 to 80,186
_4917
Ac3H11_4918 - Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2), at 80,342 to 81,928
_4918
Position (kb) 79
80
81 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 78.898 kb on + strand, within Ac3H11_4915 at 78.898 kb on + strand, within Ac3H11_4915 at 78.899 kb on - strand, within Ac3H11_4915 at 78.979 kb on + strand, within Ac3H11_4915 at 78.980 kb on - strand, within Ac3H11_4915 at 79.331 kb on - strand, within Ac3H11_4916 at 79.331 kb on - strand, within Ac3H11_4916 at 79.459 kb on + strand, within Ac3H11_4916 at 79.460 kb on - strand, within Ac3H11_4916 at 79.520 kb on - strand, within Ac3H11_4916 at 79.520 kb on - strand, within Ac3H11_4916 at 79.917 kb on + strand, within Ac3H11_4917 at 79.918 kb on - strand, within Ac3H11_4917 at 79.918 kb on - strand, within Ac3H11_4917 at 80.040 kb on + strand, within Ac3H11_4917 at 80.040 kb on + strand, within Ac3H11_4917 at 80.040 kb on + strand, within Ac3H11_4917 at 80.040 kb on + strand, within Ac3H11_4917 at 80.040 kb on + strand, within Ac3H11_4917 at 80.041 kb on - strand, within Ac3H11_4917 at 80.041 kb on - strand, within Ac3H11_4917 at 80.049 kb on + strand, within Ac3H11_4917 at 80.061 kb on + strand, within Ac3H11_4917 at 80.061 kb on + strand, within Ac3H11_4917 at 80.061 kb on + strand, within Ac3H11_4917 at 80.061 kb on + strand, within Ac3H11_4917 at 80.062 kb on - strand, within Ac3H11_4917 at 80.062 kb on - strand, within Ac3H11_4917 at 80.062 kb on - strand, within Ac3H11_4917 at 80.062 kb on - strand, within Ac3H11_4917 at 80.062 kb on - strand, within Ac3H11_4917 at 80.259 kb on - strand at 80.541 kb on + strand, within Ac3H11_4918 at 80.541 kb on + strand, within Ac3H11_4918 at 80.541 kb on + strand, within Ac3H11_4918 at 80.542 kb on - strand, within Ac3H11_4918 at 80.542 kb on - strand, within Ac3H11_4918 at 80.542 kb on - strand, within Ac3H11_4918 at 80.563 kb on - strand, within Ac3H11_4918 at 80.577 kb on + strand, within Ac3H11_4918 at 80.578 kb on - strand, within Ac3H11_4918 at 80.578 kb on - strand, within Ac3H11_4918 at 80.628 kb on + strand, within Ac3H11_4918 at 80.628 kb on + strand, within Ac3H11_4918 at 80.629 kb on - strand, within Ac3H11_4918 at 80.629 kb on - strand, within Ac3H11_4918 at 80.629 kb on - strand, within Ac3H11_4918 at 80.629 kb on - strand, within Ac3H11_4918 at 80.629 kb on - strand, within Ac3H11_4918 at 80.701 kb on - strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.703 kb on + strand, within Ac3H11_4918 at 80.704 kb on - strand, within Ac3H11_4918 at 80.704 kb on - strand, within Ac3H11_4918 at 80.704 kb on - strand, within Ac3H11_4918 at 80.883 kb on + strand, within Ac3H11_4918 at 80.883 kb on + strand, within Ac3H11_4918 at 80.884 kb on - strand, within Ac3H11_4918 at 81.006 kb on + strand, within Ac3H11_4918 at 81.006 kb on + strand, within Ac3H11_4918 at 81.006 kb on + strand, within Ac3H11_4918 at 81.099 kb on + strand, within Ac3H11_4918
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 78,898 + Ac3H11_4915 0.59 -0.4 78,898 + Ac3H11_4915 0.59 -1.6 78,899 - Ac3H11_4915 0.59 -2.8 78,979 + Ac3H11_4915 0.82 -0.1 78,980 - Ac3H11_4915 0.82 +2.1 79,331 - Ac3H11_4916 0.28 -1.1 79,331 - Ac3H11_4916 0.28 +0.3 79,459 + Ac3H11_4916 0.45 +0.8 79,460 - Ac3H11_4916 0.46 +0.0 79,520 - Ac3H11_4916 0.54 -1.5 79,520 - Ac3H11_4916 0.54 -2.6 79,917 + Ac3H11_4917 0.17 -0.7 79,918 - Ac3H11_4917 0.17 +0.8 79,918 - Ac3H11_4917 0.17 -3.2 80,040 + Ac3H11_4917 0.55 -0.4 80,040 + Ac3H11_4917 0.55 +1.1 80,040 + Ac3H11_4917 0.55 +1.8 80,040 + Ac3H11_4917 0.55 +0.1 80,040 + Ac3H11_4917 0.55 -0.7 80,041 - Ac3H11_4917 0.55 -2.4 80,041 - Ac3H11_4917 0.55 +0.3 80,049 + Ac3H11_4917 0.57 -0.0 80,061 + Ac3H11_4917 0.61 -0.2 80,061 + Ac3H11_4917 0.61 +0.9 80,061 + Ac3H11_4917 0.61 +1.4 80,061 + Ac3H11_4917 0.61 -1.7 80,062 - Ac3H11_4917 0.61 +1.9 80,062 - Ac3H11_4917 0.61 +1.7 80,062 - Ac3H11_4917 0.61 -2.6 80,062 - Ac3H11_4917 0.61 +2.0 80,062 - Ac3H11_4917 0.61 +1.7 80,259 - +0.4 80,541 + Ac3H11_4918 0.13 +0.3 80,541 + Ac3H11_4918 0.13 +1.8 80,541 + Ac3H11_4918 0.13 -3.6 80,542 - Ac3H11_4918 0.13 -0.1 80,542 - Ac3H11_4918 0.13 +0.6 80,542 - Ac3H11_4918 0.13 -1.5 80,563 - Ac3H11_4918 0.14 +1.4 80,577 + Ac3H11_4918 0.15 +2.5 80,578 - Ac3H11_4918 0.15 +1.0 80,578 - Ac3H11_4918 0.15 -0.2 80,628 + Ac3H11_4918 0.18 +1.4 80,628 + Ac3H11_4918 0.18 +2.1 80,629 - Ac3H11_4918 0.18 -1.7 80,629 - Ac3H11_4918 0.18 -1.8 80,629 - Ac3H11_4918 0.18 +1.4 80,629 - Ac3H11_4918 0.18 +2.3 80,629 - Ac3H11_4918 0.18 +0.2 80,701 - Ac3H11_4918 0.23 +0.3 80,703 + Ac3H11_4918 0.23 -3.1 80,703 + Ac3H11_4918 0.23 -3.0 80,703 + Ac3H11_4918 0.23 -1.1 80,703 + Ac3H11_4918 0.23 -1.4 80,703 + Ac3H11_4918 0.23 +0.6 80,703 + Ac3H11_4918 0.23 -2.4 80,703 + Ac3H11_4918 0.23 -0.0 80,703 + Ac3H11_4918 0.23 +0.2 80,704 - Ac3H11_4918 0.23 +0.6 80,704 - Ac3H11_4918 0.23 -0.8 80,704 - Ac3H11_4918 0.23 +1.3 80,883 + Ac3H11_4918 0.34 +0.7 80,883 + Ac3H11_4918 0.34 +0.1 80,884 - Ac3H11_4918 0.34 -0.5 81,006 + Ac3H11_4918 0.42 -1.8 81,006 + Ac3H11_4918 0.42 -2.2 81,006 + Ac3H11_4918 0.42 +1.1 81,099 + Ac3H11_4918 0.48 +1.7
Or see this region's nucleotide sequence