Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4426 and Ac3H11_4427 are separated by 29 nucleotides Ac3H11_4427 and Ac3H11_4428 overlap by 4 nucleotides Ac3H11_4428 and Ac3H11_4429 are separated by 94 nucleotides
Ac3H11_4426 - Probable transmembrane protein, at 3,023 to 4,090
_4426
Ac3H11_4427 - Probable transmembrane protein, at 4,120 to 5,073
_4427
Ac3H11_4428 - Molybdopterin-binding protein, at 5,070 to 5,891
_4428
Ac3H11_4429 - Glutamine synthetase type I (EC 6.3.1.2), at 5,986 to 7,479
_4429
Position (kb) 4
5
6 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 3.185 kb on + strand, within Ac3H11_4426 at 3.185 kb on + strand, within Ac3H11_4426 at 3.186 kb on - strand, within Ac3H11_4426 at 3.186 kb on - strand, within Ac3H11_4426 at 3.317 kb on + strand, within Ac3H11_4426 at 3.317 kb on + strand, within Ac3H11_4426 at 3.317 kb on + strand, within Ac3H11_4426 at 3.318 kb on - strand, within Ac3H11_4426 at 3.318 kb on - strand, within Ac3H11_4426 at 3.318 kb on - strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.485 kb on + strand, within Ac3H11_4426 at 3.486 kb on - strand, within Ac3H11_4426 at 3.486 kb on - strand, within Ac3H11_4426 at 3.486 kb on - strand, within Ac3H11_4426 at 3.486 kb on - strand, within Ac3H11_4426 at 4.106 kb on + strand at 4.106 kb on + strand at 4.107 kb on - strand at 4.107 kb on - strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.119 kb on + strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.120 kb on - strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.171 kb on + strand at 4.172 kb on - strand at 4.172 kb on - strand at 4.172 kb on - strand at 4.172 kb on - strand at 4.172 kb on - strand at 4.249 kb on + strand, within Ac3H11_4427 at 4.249 kb on + strand, within Ac3H11_4427 at 4.249 kb on + strand, within Ac3H11_4427 at 4.250 kb on - strand, within Ac3H11_4427 at 4.250 kb on - strand, within Ac3H11_4427 at 4.256 kb on - strand, within Ac3H11_4427 at 4.256 kb on - strand, within Ac3H11_4427 at 4.646 kb on - strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.846 kb on + strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.847 kb on - strand, within Ac3H11_4427 at 4.881 kb on + strand, within Ac3H11_4427 at 4.882 kb on - strand, within Ac3H11_4427 at 4.889 kb on - strand, within Ac3H11_4427 at 5.034 kb on + strand at 5.034 kb on + strand at 5.035 kb on - strand at 5.187 kb on + strand, within Ac3H11_4428 at 5.187 kb on + strand, within Ac3H11_4428 at 5.187 kb on + strand, within Ac3H11_4428 at 5.196 kb on + strand, within Ac3H11_4428 at 5.196 kb on + strand, within Ac3H11_4428 at 5.196 kb on + strand, within Ac3H11_4428 at 5.196 kb on + strand, within Ac3H11_4428 at 5.197 kb on - strand, within Ac3H11_4428 at 5.197 kb on - strand, within Ac3H11_4428 at 5.197 kb on - strand, within Ac3H11_4428 at 5.392 kb on + strand, within Ac3H11_4428 at 5.392 kb on + strand, within Ac3H11_4428 at 5.392 kb on + strand, within Ac3H11_4428 at 5.392 kb on + strand, within Ac3H11_4428 at 5.393 kb on - strand, within Ac3H11_4428 at 5.415 kb on + strand, within Ac3H11_4428 at 5.415 kb on + strand, within Ac3H11_4428 at 5.416 kb on - strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.496 kb on + strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.497 kb on - strand, within Ac3H11_4428 at 5.610 kb on + strand, within Ac3H11_4428 at 5.611 kb on - strand, within Ac3H11_4428 at 5.624 kb on + strand, within Ac3H11_4428 at 5.661 kb on + strand, within Ac3H11_4428 at 5.662 kb on - strand, within Ac3H11_4428 at 5.662 kb on - strand, within Ac3H11_4428 at 5.763 kb on + strand, within Ac3H11_4428 at 5.763 kb on + strand, within Ac3H11_4428 at 5.763 kb on + strand, within Ac3H11_4428 at 5.763 kb on + strand, within Ac3H11_4428 at 5.764 kb on - strand, within Ac3H11_4428 at 5.764 kb on - strand, within Ac3H11_4428 at 5.774 kb on + strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.775 kb on - strand, within Ac3H11_4428 at 5.956 kb on + strand at 5.956 kb on + strand at 5.957 kb on - strand at 5.976 kb on + strand at 5.976 kb on + strand at 5.976 kb on + strand at 5.976 kb on + strand at 5.977 kb on - strand at 5.977 kb on - strand at 5.977 kb on - strand at 5.984 kb on + strand at 6.015 kb on + strand at 6.015 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.005 mg/ml remove 3,185 + Ac3H11_4426 0.15 -1.3 3,185 + Ac3H11_4426 0.15 -0.7 3,186 - Ac3H11_4426 0.15 -2.3 3,186 - Ac3H11_4426 0.15 -2.5 3,317 + Ac3H11_4426 0.28 -2.7 3,317 + Ac3H11_4426 0.28 +0.3 3,317 + Ac3H11_4426 0.28 -2.6 3,318 - Ac3H11_4426 0.28 -0.3 3,318 - Ac3H11_4426 0.28 -1.3 3,318 - Ac3H11_4426 0.28 -1.9 3,485 + Ac3H11_4426 0.43 -1.2 3,485 + Ac3H11_4426 0.43 -0.2 3,485 + Ac3H11_4426 0.43 -2.6 3,485 + Ac3H11_4426 0.43 -1.8 3,485 + Ac3H11_4426 0.43 -2.0 3,485 + Ac3H11_4426 0.43 -1.2 3,486 - Ac3H11_4426 0.43 -0.7 3,486 - Ac3H11_4426 0.43 +1.3 3,486 - Ac3H11_4426 0.43 +0.1 3,486 - Ac3H11_4426 0.43 -0.9 4,106 + -2.9 4,106 + +0.9 4,107 - -0.8 4,107 - -0.9 4,119 + -0.3 4,119 + -0.6 4,119 + +2.2 4,119 + +0.7 4,119 + -2.9 4,119 + -1.9 4,119 + +1.3 4,119 + +1.3 4,119 + +0.9 4,119 + -0.6 4,119 + -0.3 4,120 - -0.9 4,120 - +2.3 4,120 - -3.4 4,120 - +1.5 4,120 - +0.7 4,120 - -0.2 4,120 - -0.5 4,120 - -3.0 4,120 - -0.4 4,120 - +0.5 4,120 - +0.3 4,120 - +1.8 4,120 - +2.4 4,171 + -1.2 4,171 + -1.7 4,171 + -2.3 4,171 + +0.1 4,171 + -0.8 4,171 + -0.8 4,171 + -1.2 4,172 - -1.8 4,172 - -0.7 4,172 - +1.9 4,172 - +3.3 4,172 - -1.4 4,249 + Ac3H11_4427 0.14 -0.5 4,249 + Ac3H11_4427 0.14 -1.2 4,249 + Ac3H11_4427 0.14 +0.5 4,250 - Ac3H11_4427 0.14 +2.0 4,250 - Ac3H11_4427 0.14 +0.9 4,256 - Ac3H11_4427 0.14 +1.4 4,256 - Ac3H11_4427 0.14 +0.7 4,646 - Ac3H11_4427 0.55 -0.5 4,846 + Ac3H11_4427 0.76 +0.8 4,846 + Ac3H11_4427 0.76 +0.3 4,846 + Ac3H11_4427 0.76 -3.3 4,846 + Ac3H11_4427 0.76 +1.6 4,846 + Ac3H11_4427 0.76 +2.9 4,846 + Ac3H11_4427 0.76 -0.3 4,846 + Ac3H11_4427 0.76 +1.4 4,847 - Ac3H11_4427 0.76 +0.7 4,847 - Ac3H11_4427 0.76 -2.8 4,847 - Ac3H11_4427 0.76 -0.2 4,847 - Ac3H11_4427 0.76 -2.3 4,847 - Ac3H11_4427 0.76 -0.5 4,847 - Ac3H11_4427 0.76 -0.6 4,847 - Ac3H11_4427 0.76 +2.0 4,847 - Ac3H11_4427 0.76 +1.9 4,881 + Ac3H11_4427 0.80 +1.9 4,882 - Ac3H11_4427 0.80 -1.7 4,889 - Ac3H11_4427 0.81 -1.3 5,034 + -0.3 5,034 + +0.4 5,035 - +0.7 5,187 + Ac3H11_4428 0.14 +2.1 5,187 + Ac3H11_4428 0.14 -2.7 5,187 + Ac3H11_4428 0.14 +1.5 5,196 + Ac3H11_4428 0.15 -0.0 5,196 + Ac3H11_4428 0.15 -2.1 5,196 + Ac3H11_4428 0.15 +2.1 5,196 + Ac3H11_4428 0.15 -2.3 5,197 - Ac3H11_4428 0.15 +1.5 5,197 - Ac3H11_4428 0.15 -0.3 5,197 - Ac3H11_4428 0.15 -1.3 5,392 + Ac3H11_4428 0.39 +2.3 5,392 + Ac3H11_4428 0.39 -0.6 5,392 + Ac3H11_4428 0.39 +0.3 5,392 + Ac3H11_4428 0.39 -0.3 5,393 - Ac3H11_4428 0.39 +3.0 5,415 + Ac3H11_4428 0.42 -1.9 5,415 + Ac3H11_4428 0.42 +0.5 5,416 - Ac3H11_4428 0.42 -0.7 5,496 + Ac3H11_4428 0.52 -1.7 5,496 + Ac3H11_4428 0.52 -0.5 5,496 + Ac3H11_4428 0.52 -2.3 5,496 + Ac3H11_4428 0.52 -0.1 5,496 + Ac3H11_4428 0.52 +1.1 5,496 + Ac3H11_4428 0.52 +0.7 5,496 + Ac3H11_4428 0.52 -0.0 5,496 + Ac3H11_4428 0.52 -0.2 5,496 + Ac3H11_4428 0.52 +1.3 5,497 - Ac3H11_4428 0.52 +0.1 5,497 - Ac3H11_4428 0.52 +1.5 5,497 - Ac3H11_4428 0.52 -3.2 5,497 - Ac3H11_4428 0.52 +0.3 5,497 - Ac3H11_4428 0.52 +0.5 5,497 - Ac3H11_4428 0.52 -0.0 5,610 + Ac3H11_4428 0.66 +1.5 5,611 - Ac3H11_4428 0.66 -3.3 5,624 + Ac3H11_4428 0.67 +0.5 5,661 + Ac3H11_4428 0.72 -2.3 5,662 - Ac3H11_4428 0.72 -1.7 5,662 - Ac3H11_4428 0.72 +3.0 5,763 + Ac3H11_4428 0.84 -0.3 5,763 + Ac3H11_4428 0.84 +4.2 5,763 + Ac3H11_4428 0.84 +2.6 5,763 + Ac3H11_4428 0.84 -1.3 5,764 - Ac3H11_4428 0.84 +0.9 5,764 - Ac3H11_4428 0.84 +1.6 5,774 + Ac3H11_4428 0.86 +1.4 5,775 - Ac3H11_4428 0.86 +0.1 5,775 - Ac3H11_4428 0.86 +1.2 5,775 - Ac3H11_4428 0.86 +0.3 5,775 - Ac3H11_4428 0.86 +1.1 5,775 - Ac3H11_4428 0.86 +1.1 5,775 - Ac3H11_4428 0.86 +1.6 5,775 - Ac3H11_4428 0.86 -3.0 5,956 + +1.3 5,956 + -0.0 5,957 - +1.2 5,976 + -3.6 5,976 + +1.4 5,976 + -1.6 5,976 + +1.4 5,977 - -0.9 5,977 - +1.3 5,977 - -2.2 5,984 + +1.2 6,015 + -0.2 6,015 + -0.3
Or see this region's nucleotide sequence